LOC120552566


Basic Information

Item Value
gene id LOC120552566
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 28781890 ~ 28846253 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039790735.1
CAGAGTCTCGGTGTGTCCTCCAGGTCTCGTCATTCAGCTTCAGCTTCAGACCCAGAACCAGCTCCAGAGTCTCCGTCCCGGCTGCTCATGGAGAGACTCTCGGCTCTCAGCCGTCACAGGAACTCAAACTTTACAggagtttaattaaaaaaaggaaagaagaaagaaagaaagaaaaacagccgCACACATGACGTTTTGGATAGGAGGAGgagcggcgctgctgctgctgctgctcggcCGCTGCTGCTGCACCGATCCCGGCAGGAAAGtgtgcCAGGGGTTGAGTAACCAGCTGACCTTGTTGGGGACCCGGGACAATCACTATGACAACATGGTGAGGATGTACGCTAACTGCTCCGTGGTCCTGGAGAACCTGGAGGTCACGTACACGCTGGAGCACCAGGACCTGTCCTTCCTGCAgAACATCCAGGAAGTGGGCGGCTACGTTCTGATCGCCATGAATGAAGTGGCCACCATCCCATTGGTCAACCTGAAGGTGATCCGAGGTCAGAACCTGTATGACAACCACCTGGCTCTGCTGGTCATGTCCAACTACAACCAGAACCGCTCGTCTCCTACGCTCAACTACAGCAGTGGGCTGAGACAGCTGCAGCTCAGCAGTCTGaccgAGATTCTGAAAGGAGGCGTAAAGATGACCAACAATCCGTTGCTATGCAACACGGAGACCATCCAGTGGTGGGACATCCTGGACAGAAGCAGCAACCCCAGCATGGTTTTTAAGACAAACACCTTCACACCTAAATGTCAGCAGTGTGATCCCGGCTGTTTTAACGGCTCGTGTTGGGCAGCAGGACCGGATCACTGCCAGAAATTCACTAAGCTGCAGTGTGCCGAACAGTGCAGCCGGAGGTGCCGCGGGCCCAAACCCAGCGACTGCTGTAACGAACACTGTGCTGCCGGCTGCTCCGGACCGCGAGCCACCGACTGCCTGGCCTGCAGGGATTTTAACGATGACGGGACGTGTAAAGATGCTTGTCCTCCTCAGACTCTCTATGACCCAAAAACCCACCAGGTGGTCAGCAACCCCAACGCCAAGTTCACCTTTGGGGCGACCTGCGTCAAAGCCTGCCCATATAACTACGTGGTGACAGATGGGTCGTGTGTTCGTACCTGCGGCGCTGGGATGTACGAGATGGAGGAGAACGGAGTCCAACGCTGCAAGGCATGTGACGGTCCCTGTCCTAAAgtCTGTGATGGCGTCGGGGTAGGCGCTCTGATTAAGACGATGGCCGTGAACGCCTCCAACATCGAGTCCTTCAGGAACTGCACCAAGATCAACGGGGACGTGTCCCTCATTGGGACGTCCTTCACCGGGGACGCGCACTATAAAATCCCTCCCATGGACCCGGCTAAACTCGAGTACTTCAGGACAGTAAAGGAAATCACAGGTTTTCTGGTGATCCAGTCCTGGCCGGAGAACCTGacgtctctgtctgtgtttgaaaACCTGGAGATAATCAGAGGAAGAACAACACACGCGCAGCACAGTCTGGCCGTGGTGCGGGCCAAGCACCTGCGCTGGTTGGGTCTGCGCTCTCTGAAAGAGGTGAGCGCCGGCTTGGTGATCCTGAAGGACAACTCTGAGCTGTGCTACACGCGGCCCGACCAGTGGACGCGCCTCTTCAGATCCAGAGACCAGACGGTCAGCATGCGCCAAAACGCTCCCCCAGACTTCTGCGAAAAGCAGAATCGAACCTGTGACCTGGAGTGTACAGACGATGGCTGCTGGGGTCCGGGTCCCACGATGTGTGTCGCCTGTCGGCAtttcaacagcagggggcgctgtgTGGCGCACTGCAACCTGCTGCAGGGCGAGCCCAGAGAGGTGGAGGTGAACAGTAGCTGTGTCCAGTGTCACCCAGAGTGTCTGCTGAAGACCGGGACCCCGACCTGCCACGGACCAGGTCCGgaccagtgttcccagtgtGCCCACTTTAAAGACGGCCCCCACTGTGTAGCGCGCTGCCCCCACGGCGTGCTGGGAGACGGAGACACGCTGATCTGGAAATACCCCGacgggtcaggccagtgccagcCTTGCCACCAGAACTGCAGCGACGGgTGCTCTGGAGCCGGACTGTCTGGATGCACCGGTGCTCCCACCCACTCCACGCTGGCGGCCGGCGTGGTCGGCGCGCTGCTGATCGCCGTCATCGTGTCAGTGGTCATCTTTGTGTTGCTGCGGCGACGAAGAATCCGGAGGAAGAGGACCCTGCGCCGGCTGCTGCAGGAGAGAGAGCTTGTGGAGCCGCTGACTCCAAGCGGCGAGGCTCCGAACCAGGCGCTGCTCCGCATCCTGAAGGAGACAGAGTTCAAGAAAATCAGGGTGCTCGGCTCCGGGGCCTTCGGGACCGTCTTCAAGggTCTGTGGATCCCCGAGGGAGAGAACGTGAGGATCCCAGTAGCCATTAAAGTTCTCCGAGAGGCCACGTCACCTAAAGCCAACAAAGAAATCCTCGATgaggcgTACGTGATGGCGAGCGTGGACCACCCACACGTGTGTCGCCTGCTGGGGATCTGCCTGACGTCGTCCGTCCAGCTGGTCACTCAGCTGATGCAGCACGGCTGCTTGCTGGACTACGTCCGGCACCACCGGGAGAACATCGGCGGCCAGTGGCTGCTCAACTGGTGTGTCCAGATCGCCAAGGGGATGAACTACCTGGAGGAGCGTCACCTGGTGCACCGAGACCTGGCGGCGAGGAACGTCCTGGTGAAAACTCCGAACCACGTCAAGATCACAGACTTCGGCCTCGCCAGGCTGCTGACGGCCGACGAGAAGGAATACCACGCTGACGGGGGGAAGGTTCCCATTAAGTGGATGGCGTTGGAGTCAATCCTCCAGTGGACCTACACACATCAAAGTGACGTCTGGAGCTATGGTGTGACCGTGTGGGAGCTGATGACGTTCGGCTCCAAGCCGTACGACGGCATCCCGGCCAGCGACATCTCCGCGGTGCTGGAGCGAGGAGACCGGCTGCCGCAGCCGCCCATCTGCACCATCGACGTCTACATGATCATGGTGAAATGTTGGATGATCGACCCGTCCAGTCGTCCCAGGTTCAGAGAGCTGATAGTGGAGTTCTCTAAAATGGCCAGAGATCCATCCAGATACCTggttgttcagGGCAACCTCCCCAGTCCGACAGATAGCAGGTTTTACTCTCGCCTGCTGAGCTCAGACGACATGGAGGATGTGGTGGATGCTGAGGAGTATCTGCAACCTTACAAAGGACAGGGTAACCAGGACAACCATTCCTGCAGCGCCACGAATTGTTATCCAGTCAGAGAGAACAGCATCGCCCTGCGTTACATCACCGACCCGACGCACAACACGCTGGAGAAAGAAGACTTCCCCGGCCACGagtACATGAACCAGAGTATGAGTGACAACAGCCGGAGCAGCAGGCTGTCGGATGTGTTGAATCCCAACTACGAGGACCTGAGCCTGGGTTGGGGCGCGGCCTCGCTCCCCTTCCCGCTGGAAGATCTGAAGCCTTTTCCCAGAGTTCCCAAGGACCCCGAGGTCCCTGAGTACCTGAACACCGCCCAGAGCTCACTTCCGCTGGTCGCCAGCGACAGCCTCGACAACCCGGACTACCAGTCGGACTTCCTGCCCTCCGCCACGAACAGTGTTCCTTTAACGGGGAATGGTCTGTTCCTCCCGGCCGCAGAGAACCTAGAGTACCTGGGTCTGGGTGCTGCGCTGCACGCCCACGTCCGCTAGGGGGGGCGATGTGCCTCGGCCTTCAGACACTTAAAACTAAAGCTGTGATGTTCTGTGGAAAACAAACTGCCTGTGGGTACGcgatctgtgctgcctgcacgatccaacatgatgataatcctgttttacgcACCTTTGCACTGCAATAGCAATGAATCGCAAAGGGGAGTGCCCCCCTAGAGGACACGTCACACTTTTACTCCCCATAGGTCGGTATGCaatctgtgctgcctgcacgatccacgatgcgcatgcgcagatgataatcctgtttacaccactgcacgatctgttccacgcttgcGCACTTTTGCACCGCGGgaatttcattcatttcacaGCGCTCGCAAAGGGGAGAGTGGAGGAAACTGAAGGTCAGCAGTGACAGAAAGACTCAGACTTCATTCCACATGGAACCAACATGGTGTATGTTCATGTAACATGTAACAACTCCTTTATTATTTTGGATTGGCAACCACGTAAACACCTCGTAATGctacataatacataataagctacatttaaaaacatcacgACATCCCCACACTACATGTCACACAAATAACAATGTTGCCAAGACGTCCACGGACGACGAAATGCGGTTTTGGATCAGTGACAATAAGTACTTCTTTTAAATATCTTTATAAAACAGACCTGCCCAATGAATAacataaaatgtagcctacaaaaATAGGCCGCCAGTTGTGCCGCCTGGCCGTATGCGTGATACAAATAGCGTAGGGAAACCGTCACGTTTTCTACTATGTATTTCAGCGCATgcacaacccgttctcactctgaACTCGTAAAATTTGTACGTTTGTAGAACGTACCGGGGAGTGCAGCAGCTACAAAGGgtttagagagtagtatgtaaggacGAAATTCTGCGCACGAagattggtcggggtggtggatgggtcaaacacagaattttcacccaggagactgggaaTCATGTCACTCTGGGATCGGCATGTTTCctaaagtcgctttcttctttaagcccacccatgaccttttccttaacataactgcgtcaaaagggccgccaatagtcccgaccaattTTCAGCATTTAGATAAAGCGCGTTATAggacactaaaggagacttttagcgtcatataaaaacGACAAAAGCACCCGACCAagtgtccgtattttacgagatgggagcgAGAATCTGTTTGCATGCGCATTTCGGATCttgcaggcagcacagatcgCGTACCGACACTGCCGCCTGCTTGGATTCATACTGCTGACAGTATTTAATGTAGCTGTATTTATTGTAAAGTCTTCCAGGAAATGCTGACTGAGCGTTTTCTGCGTTTTACACTGGAACACAACGGCAATCAGGCCGCCGTTACAgcgggagaggagagacagacgcTTTGCAGGGATTCAAACCGTTAGCGTCCCATATGTTAGCGGTGCGTAGGAAACCatgcacattatttttttttgggacaatttggttgaaagaacaTCCAGATTTCAGAcatagaaacattttgaaaacgggttAACAGGAAGGTTAAAGAAGTTAATGCCCTTAAAGGGTACCTACCTTTTTTTCACCCTGTACCCTATGTTCCTATTatagttaataggacaattgtaaaatttgtatttaccttcacaaaagttctgtttttgctgctgacagactctgacAGTGTCTCACAACATTATgaaaaaggatttctaaggaggtcgacctctCTGTTGAAgagttttttaaacataaaaacatccaccAAACTGCGTTCgcaaaacccaccagactcctagtaaataaacagtaatttt
>XR_005638031.1
GCAGAGTCTCGGTGTGTCCTCCAGGTCTCGTCATTCAGCTTCAGCTTCAGACCCAGAACCAGCTCCAGAGTCTCCGTCCCGGCTGCTCATGGAGAGACTCTCGGCTCTCAGCCGTCACAGGAACTCAAACTTTACAggagtttaattaaaaaaaggaaagaagaaagaaagaaagaaaaacagccgCACACATGACGTTTTGGATAGGAGGAGgagcggcgctgctgctgctgctgctcggcCGCTGCTGCTGCACCGATCCCGGCAGGAAAGtgtgcCAGGGGTTGAGTAACCAGCTGACCTTGTTGGGGACCCGGGACAATCACTATGACAACATGGTGAGGATGTACGCTAACTGCTCCGTGGTCCTGGAGAACCTGGAGGTCACGTACACGCTGGAGCACCAGGACCTGTCCTTCCTGCAgAACATCCAGGAAGTGGGCGGCTACGTTCTGATCGCCATGAATGAAGTGGCCACCATCCCATTGGTCAACCTGAAGGTGATCCGAGGTCAGAACCTGTATGACAACCACCTGGCTCTGCTGGTCATGTCCAACTACAACCAGAACCGCTCGTCTCCTACGCTCAACTACAGCAGTGGGCTGAGACAGCTGCAGCTCAGCAGTCTGaccgAGATTCTGAAAGGAGGCGTAAAGATGACCAACAATCCGTTGCTATGCAACACGGAGACCATCCAGTGGTGGGACATCCTGGACAGAAGCAGCAACCCCAGCATGGTTTTTAAGACAAACACCTTCACACCTAAATGTCAGCAGTGTGATCCCGGCTGTTTTAACGGCTCGTGTTGGGCAGCAGGACCGGATCACTGCCAGAAATTCACTAAGCTGCAGTGTGCCGAACAGTGCAGCCGGAGGTGCCGCGGGCCCAAACCCAGCGACTGCTGTAACGAACACTGTGCTGCCGGCTGCTCCGGACCGCGAGCCACCGACTGCCTGGCCTGCAGGGATTTTAACGATGACGGGACGTGTAAAGATGCTTGTCCTCCTCAGACTCTCTATGACCCAAAAACCCACCAGGTGGTCAGCAACCCCAACGCCAAGTTCACCTTTGGGGCGACCTGCGTCAAAGCCTGCCCATATAACTACGTGGTGACAGATGGGTCGTGTGTTCGTACCTGCGGCGCTGGGATGTACGAGATGGAGGAGAACGGAGTCCAACGCTGCAAGGCATGTGACGGTCCCTGTCCTAAAgtCTGTGATGGCGTCGGGGTAGGCGCTCTGATTAAGACGATGGCCGTGAACGCCTCCAACATCGAGTCCTTCAGGAACTGCACCAAGATCAACGGGGACGTGTCCCTCATTGGGACGTCCTTCACCGGGGACGCGCACTATAAAATCCCTCCCATGGACCCGGCTAAACTCGAGTACTTCAGGACAGTAAAGGAAATCACAGGTTTTCTGGTGATCCAGTCCTGGCCGGAGAACCTGacgtctctgtctgtgtttgaaaACCTGGAGATAATCAGAGGAAGAACAACACACGCGCAGCACAGTCTGGCCGTGGTGCGGGCCAAGCACCTGCGCTGGTTGGGTCTGCGCTCTCTGAAAGAGGTGAGCGCCGGCTTGGTGATCCTGAAGGACAACTCTGAGCTGTGCTACACGCGGCCCGACCAGTGGACGCGCCTCTTCAGATCCAGAGACCAGACGGTCAGCATGCGCCAAAACGCTCCCCCAGACTTCTGCGAAAAGCAGAATCGAACCTGTGACCTGGAGTGTACAGACGATGGCTGCTGGGGTCCGGGTCCCACGATGTGTGTCGCCTGTCGGCAtttcaacagcagggggcgctgtgTGGCGCACTGCAACCTGCTGCAGGGCGAGCCCAGAGAGGTGGAGGTGAACAGTAGCTGTGTCCAGTGTCACCCAGAGTGTCTGCTGAAGACCGGGACCCCGACCTGCCACGGACCAGGTCCGgaccagtgttcccagtgtGCCCACTTTAAAGACGGCCCCCACTGTGTAGCGCGCTGCCCCCACGGCGTGCTGGGAGACGGAGACACGCTGATCTGGAAATACCCCGacgggtcaggccagtgccagcCTTGCCACCAGAACTGCAGCGACGGgTGCTCTGGAGCCGGACTGTCTGGATGCACCGGGTAAAACTACAACTTTACCACCAAAGTTCACAGAAAAGCAACttgctttttgctttttccacagCCAGAGGCATTCAGCAAATCCTCCAAACCGTACGGCGATATGGGTCCTTTGTTCCTCCGCTCTAACACGACCTATTTTCCGTCCCAGTTTGGTGAGGTtcaggcagtggtgtagtctgtgtgatacgcagTGCTCCCACCCACTCCACGCTGGCGGCCGGCGTGGTCGGCGCGCTGCTGATCGCCGTCATCGTGTCAGTGGTCATCTTTGTGTTGCTGCGGCGACGAAGAATCCGGAGGAAGAGGACCCTGCGCCGG

Function

GO: NA

KEGG:

id description
K04361 EGFR, ERBB1; epidermal growth factor receptor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039790735.1 True 5561 mRNA 0.54 27 28781890 28846252
XR_005638031.1 False 2440 transcript 0.57 17 28800499 28846253

Neighbor

gene id symbol gene type direction distance location
LOC120552567 NA coding downstream 426243 28303334 ~ 28355647 (-)
LOC120552593 NA coding downstream 1469525 27310012 ~ 27312365 (-)
LOC120552591 NA coding downstream 1556898 27223754 ~ 27224992 (-)
LOC120552579 NA coding downstream 1576737 27195330 ~ 27205153 (-)
LOC120552735 nebl coding downstream 1592346 27136771 ~ 27189544 (-)
dnah5l LOC103377303,LOC103367559 coding upstream 83978 28930231 ~ 29094205 (-)
LOC120552571 NA coding upstream 278961 29125214 ~ 29147661 (-)
LOC120552587 hus1 coding upstream 305181 29151434 ~ 29161971 (-)
dnph1 NA coding upstream 756849 29603102 ~ 29610341 (-)
LOC120552739 NA coding upstream 783052 29629305 ~ 29672772 (-)
G223692 NA non-coding downstream 7643 28708699 ~ 28774247 (-)
G223694 NA non-coding downstream 20680 28667074 ~ 28761210 (-)
G223696 NA non-coding downstream 70181 28646064 ~ 28711709 (-)
G223778 NA non-coding downstream 87421 28658909 ~ 28694469 (-)
LOC120552606 NA non-coding downstream 128966 28651955 ~ 28652924 (-)
G223798 NA non-coding upstream 4410 28850663 ~ 28852850 (-)
G223700 NA non-coding upstream 16122 28862375 ~ 28902431 (-)
G223808 NA non-coding upstream 61788 28908041 ~ 28928511 (-)
G223847 NA non-coding upstream 296675 29142928 ~ 29145651 (-)
G223851 NA non-coding upstream 317703 29163956 ~ 29165000 (-)
G223686 LOC100697526 other downstream 263964 28011028 ~ 28517926 (-)
LOC120552569 NA other downstream 283878 27258373 ~ 28498012 (-)
G223746 NA other downstream 586465 28176365 ~ 28195425 (-)
G223681 NA other downstream 866057 27897134 ~ 27915833 (-)
G223646 fars2,LOC102791206 other downstream 986039 27756346 ~ 27795851 (-)
LOC120552583 NA other upstream 454437 29300690 ~ 29319934 (-)
LOC120552608 NA other upstream 633556 29479809 ~ 29543351 (-)
G223911 NA other upstream 704142 29550395 ~ 29563368 (-)
LOC120552738 yipf3,LOC106605823 other upstream 765739 29611992 ~ 29620659 (-)
G223897 NA other upstream 865761 29712014 ~ 29746456 (-)

Expression


Co-expression Network