LOC120552571


Basic Information

Item Value
gene id LOC120552571
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 29125214 ~ 29147661 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039790743.1
TGCGGAATGTATTCCGTGGAAATCCCCAGTGAGTAGCTGATGGAAGTCCGATGCAGGGTCTAACTACGCAGCAGAGATGAAGCGACAACTAAACCATCCTGAAGCTGTTTgtgaagaggaagaaaggaggctGGTGTGAGGAAGCTGACCATGGCTTCTCTTTAAAGTGGTATGGACACTTTTCTTGGATGGAATACAGTGGAAATAAGGACGAGCTCTTTTGCAGCATATGACATTTCCCCAGCGGAGCTGATAGCCCAACAGCCAGAGAGGAGTGTGTTTGAGTGCTCGCCCTCACAGAGACTGACTTCAGATCAGAAGATGAGTgatttggaggaagaggaggacggaGCAGAGTCTGTAGTATCTGGCTGTCAGTCTATGAAGAGTGACCGGTCCAGAGTTCAGCCTCTATACTTCAGTAAAgaacctggaccctcagacacaaaGCTGACTTCAGATCAGAAGATGAGTgatttggaggaagaggaggacggaGCAGAGTCTGTAGTATCTGGCTGTCAGTCTATGAAGAGTGACCGGTCCAGAGTTCAGCCTCTATACTTCAGTAAAgaacctggaccctcagacacaaaGAAGAGGAGTGATGTTTCTGAGGAGGAGCAGCCGCCCAGAACCAGAACTggactacagacagacagaaggaccAGCACTGAACAAATGATCGATATTCGGCATATACATCAGATCAGAGTGAAGGGGACATATGAACGTGTGACTGAAGGAGCTGatcaaacaggaagtggaaccCCCCTCAACAGGATCTACACTGTGCTCTACATCACTGATGAACTGAGTGAAGAAGTTAATACCCAACATGAGGTGAGGCAGCTTGAGACAGCTTCCAAGATGAAGACCCTCCATGACTCTCCAATCAAGTGCAGCGACATCTTTAAAGCCTTACCTGaccaacagaaacacatcagaGTCGTTATGACGATCGGTGTCGCTGGCGTTGGAAAAACCTTCTCAGTGCAGAAGTTCTGTCTGGACTGGGCCGAGGGTTTGGAAAACCAAGATGTGGATCTGGTGATTCCTCTTTCCTTCAGGGAGCTGAACTTGATCAAAGATGAGCAGTACAGTCTTCTGGAGCTGCTCCGTGTTTTCCATCCAGCATTACAGGAGGTCACAGCAGAGCAGCTCGCTGGCTCTAAAGTTCTCTTCATCTTTGACGGCCTGGATGAAAGCAGACTTTACCTGGATTTCAACAACAATGAGGCTGTTTCTGATGTCACACAGAAGTCATCGGTCAACGTGCTGTTGACAAACCTCATCCAGGGGAAGCTGCTTCCCTCGACTCTCGTCTGGATAACTtcccgacctgcagcagccaatcagatccctcctgcgtGTGTTGACAGGGTAACAGAAGTACGAGGCTTCACTGCACGAcggaaggaggagtacttcaggaagagagtcagtgatgaagagctgtccagcagaatcatctcccacatcaagacctccaggagcctccacatcatgtgtctgattccagtcttctgctggatcactgctacagttctggaccaCATGTTGACTACAGACCagagaggagagctgcccaagaccctaactgacatgtactcacacttcctgctggttcagacaaagaggaagaagctCAAGTATGCTGAGGGACATGAGACGAGTCCACAGGAGCTGACGGAGGCTGACAGGGAAGTTCTTCTGAAGCTGGGGAGGCTGGCGTTTGAACAGCTGGAGAAAGGAAACATCATGTTCTACCAAGAAGACCTGGAGCGCTGTGGTCTGGATGTCACAGAGGCCTCGCTGTACTCAGGAGTTTGTTCAGAGATCTtcaaaaaagagagtgtgaTCTTCCAGAAAACAGTCTACTGCTTCGTTCATCTGagcgttcaggagtttctggctgcagtctacctgttccactgttacaccaacaggaacacacaggtaATGGAGGACTTCCTGGGGAAGATTTCTATGGATGTCTTCCTGAAGAAAGCCATGAAGAAATCTCTTGAAAGTAAAAATGGCCACCTGGACCTGTTTGTCCGCTTCCTTCATGGCCTCTCTCTGGAGTCCAACCAGAGACTCTTAGGAGGCCTGCTGgatcagacagacaacagtccAGAAATCATCCAGAGAGCCATCAACAACCTGAAGAAGATGAATACTGATAAGATCTCTCCTGACAGAAGCATCAACATCTTCCATTGTCTGACGGAGATGAACGACCACTCAGTCAATCAAGAGATCCAAGAGTTCCTGAAGTCAGAGAACAGATCAGAGAAGAGACTCTCTGTGATCCACTGCTCAGCTCTGTCCTACATGCTGCAGATGTCAGAGGAGGTTCTGGATGAGTTGGACCTGAGTCAGTACAACACAACAGTGGAGGGACGACtgagactgattccagctgtgaGGAACTGCAGAAAGGCTCGACTCACTGGATGTGAACTCTCAGAGGCCCACTGTGAAGTTgtggcctcagctctgaagtccaacccctctactctgagagagctggacttGAGTCAGAACAAGCTGGAGGATTCAGACGTGAAGCTTCTGTGTGCTGGACTGGCAACTCCAAACTGTGGACTGGAGACTCTAAGAATGCAGTGGTGCagtttgtcagagatcagctgtgcttctctggcctcagctctgtcgtctaacccctcccatctgagagagctggagctAGATGGAAACGAGTTGCAGAATTCAAGAGTGAAGCAGCTTTGTAGTTTTCTGGAGAATCCACACTGTCGACTGGAGACTCTAAGATTGAGGAGCTGCAGattgtcagagatcagctgtgcttctctggtctcagctctgaagtccaacccctcccatctgaaagagctggacctgaggGACAACCACCTGAAGGAGTCAGACGTGAAGCAGCTGTGTGATCTGAAGGAGAGTCCAgactgtagactggagactctgaaATGGTGATCTCTGTCAGAGTGATCAGAAAGTTTGATGTGTTGAGACACCATGTGGAGTCCTCCATCATCCCTGTGTGTTCCTCTGGATATGACAGAGTACCATCAGTGTATCTGgactgctctgctgctgctctgtccttctacacagtctctgCAGACACACTGAGACTCCTCCTGCTCCACCCTCCATCTggacaagaagaaaaagaagataaaaCCTGTAAAAAGTGTAGATTTAATCCAAGTTCCACTGAAGTCTATAAACTGAAAACACGATTCTGTctcttgtttttgtaaaaaactgtGACTTTAATAAGATGATAATGGCTAGGGTGGTGGTTTTTGAGAAAATGTCAaacggtttgccagattggatgtctgcaCTAGAAAATGGTGAAAGTATCTGAACTTTCTGGAGGtctcctaagaagctttgtgctggggagagacctgtatgatgggcttatggtgttgtcatttatacttatgtttatttggtttattgtctattttggtGAATGATCTGAGTAGCTTTTAGTCTCAGAAATATGTTCTTTATTTaccaaaaaataacataaagcTTTAAACTTTACTGTCGTAAGTGCCATGTCGTCATGTACATGTTTATCAGGGCTGGGTGTTCTATATTTACTAACCAAAGAATAAGCCATTCACAGTACCGTATGCtgtaaaacattgaaaaaaaatgtaaagtgcaCACACACTAAATTGCACATTTGTGCCTCAGCTGAACTTTTAGCATAatgtaaacaatacacaactcTCTGTGCTGTATTAATTAACTAACACCTTGTTTGGTCAAGTGTAGACTCCGTACAAAGAGAAAAGACGCTTGTGTAAATCATTTATATACAATACTTGATATGATAATTTATTATATTGGGGATAATATTATATTTCATTGATTTTTCTACCAAGGCCCAAGTTAtatgttctgtttttatattttcatcttATATTGCGACAGTTTGTATTATTCCAGaaaaaattaaactttttattCAAA
>XM_039790744.1
GGAATGTATTCCGTGGAAATCCCCAGTGAGTAGCTGATGGAAGTCCGATGCAGGGTCTAACTACGCAGCAGAGATGAAGCGACAACTAAACCATCCTGAAGCTGTTTgtgaagaggaagaaaggaggctGGTGTGAGGAAGCTGACCATGGCTTCTCTTTAAAGTGGTATGGACACTTTTCTTGGATGGAATACAGTGGAAATAAGGACGAGCTCTTTTGCAGCATATGACATTTCCCCAGCGGAGCTGATAGCCCAACAGCCAGAGAGGAGTGTGTTTGAGTGCTCGCCCTCACAGAGACTGACTTCAGATCAGAAGATGAGTgatttggaggaagaggaggacggaGCAGAGTCTGTAGTATCTGGCTGTCAGTCTATGAAGAGTGACCGGTCCAGAGTTCAGCCTCTATACTTCAGTAAAgaacctggaccctcagacacaaaGCTGACTTCAGATCAGAAGATGAGTgatttggaggaagaggaggacggaGCAGAGTCTGTAGTATCTGGCTGTCAGTCTATGAAGAGTGACCGGTCCAGAGTTCAGCCTCTATACTTCAGTAAAgaacctggaccctcagacacaaaGAAGAGGAGTGATGTTTCTGAGGAGGAGCAGCCGCCCAGAACCAGAACTggactacagacagacagaaggaccAGCACTGAACAAATGATCGATATTCGGCATATACATCAGATCAGAGTGAAGGGGACATATGAACGTGTGACTGAAGGAGCTGatcaaacaggaagtggaaccCCCCTCAACAGGATCTACACTGTGCTCTACATCACTGATGAACTGAGTGAAGAAGTTAATACCCAACATGAGGTGAGGCAGCTTGAGACAGCTTCCAAGATGAAGACCCTCCATGACTCTCCAATCAAGTGCAGCGACATCTTTAAAGCCTTACCTGaccaacagaaacacatcagaGTCGTTATGACGATCGGTGTCGCTGGCGTTGGAAAAACCTTCTCAGTGCAGAAGTTCTGTCTGGACTGGGCCGAGGGTTTGGAAAACCAAGATGTGGATCTGGTGATTCCTCTTTCCTTCAGGGAGCTGAACTTGATCAAAGATGAGCAGTACAGTCTTCTGGAGCTGCTCCGTGTTTTCCATCCAGCATTACAGGAGGTCACAGCAGAGCAGCTCGCTGGCTCTAAAGTTCTCTTCATCTTTGACGGCCTGGATGAAAGCAGACTTTACCTGGATTTCAACAACAATGAGGCTGTTTCTGATGTCACACAGAAGTCATCGGTCAACGTGCTGTTGACAAACCTCATCCAGGGGAAGCTGCTTCCCTCGACTCTCGTCTGGATAACTtcccgacctgcagcagccaatcagatccctcctgcgtGTGTTGACAGGGTAACAGAAGTACGAGGCTTCACTGCACGAcggaaggaggagtacttcaggaagagagtcagtgatgaagagctgtccagcagaatcatctcccacatcaagacctccaggagcctccacatcatgtgtctgattccagtcttctgctggatcactgctacagttctggaccaCATGTTGACTACAGACCagagaggagagctgcccaagaccctaactgacatgtactcacacttcctgctggttcagacaaagaggaagaagctCAAGTATGCTGAGGGACATGAGACGAGTCCACAGGAGCTGACGGAGGCTGACAGGGAAGTTCTTCTGAAGCTGGGGAGGCTGGCGTTTGAACAGCTGGAGAAAGGAAACATCATGTTCTACCAAGAAGACCTGGAGCGCTGTGGTCTGGATGTCACAGAGGCCTCGCTGTACTCAGGAGTTTGTTCAGAGATCTtcaaaaaagagagtgtgaTCTTCCAGAAAACAGTCTACTGCTTCGTTCATCTGagcgttcaggagtttctggctgcagtctacctgttccactgttacaccaacaggaacacacaggtaATGGAGGACTTCCTGGGGAAGATTTCTATGGATGTCTTCCTGAAGAAAGCCATGAAGAAATCTCTTGAAAGTAAAAATGGCCACCTGGACCTGTTTGTCCGCTTCCTTCATGGCCTCTCTCTGGAGTCCAACCAGAGACTCTTAGGAGGCCTGCTGgatcagacagacaacagtccAGAAATCATCCAGAGAGCCATCAACAACCTGAAGAAGATGAATACTGATAAGATCTCTCCTGACAGAAGCATCAACATCTTCCATTGTCTGACGGAGATGAACGACCACTCAGTCAATCAAGAGATCCAAGAGTTCCTGAAGTCAGAGAACAGATCAGAGAAGAGACTCTCTGTGATCCACTGCTCAGCTCTGTCCTACATGCTGCAGATGTCAGAGGAGGTTCTGGATGAGTTGGACCTGAGTCAGTACAACACAACAGTGGAGGGACGACtgagactgattccagctgtgaGGAACTGCAGAAAGGCTCGACTCACTGGATGTGAACTCTCAGAGGCCCACTGTGAAGTTgtggcctcagctctgaagtccaacccctctactctgagagagctggacttGAGTCAGAACAAGCTGGAGGATTCAGACGTGAAGCTTCTGTGTGCTGGACTGGCAACTCCAAACTGTGGACTGGAGACTCTAAGATGGTGATCTCTGTCAGAGTGATCAGAAAGTTTGATGTGTTGAGACACCATGTGGAGTCCTCCATCATCCCTGTGTGTTCCTCTGGATATGACAGAGTACCATCAGTGTATCTGgactgctctgctgctgctctgtccttctacacagtctctgCAGACACACTGAGACTCCTCCTGCTCCACCCTCCATCTggacaagaagaaaaagaagataaaaCCTGTAAAAAGTGTAGATTTAATCCAAGTTCCACTGAAGTCTATAAACTGAAAACACGATTCTGTctcttgtttttgtaaaaaactgtGACTTTAATAAGATGATAATGGCTAGGGTGGTGGTTTTTGAGAAAATGTCAaacggtttgccagattggatgtctgcaCTAGAAAATGGTGAAAGTATCTGAACTTTCTGGAGGtctcctaagaagctttgtgctggggagagacctgtatgatgggcttatggtgttgtcatttatacttatgtttatttggtttattgtctattttggtGAATGATCTGAGTAGCTTTTAGTCTCAGAAATATGTTCTTTATTTaccaaaaaataacataaagcTTTAAACTTTACTGTCGTAAGTGCCATGTCGTCATGTACATGTTTATCAGGGCTGGGTGTTCTATATTTACTAACCAAAGAATAAGCCATTCACAGTACCGTATGCtgtaaaacattgaaaaaaaatgtaaagtgcaCACACACTAAATTGCACATTTGTGCCTCAGCTGAACTTTTAGCATAatgtaaacaatacacaactcTCTGTGCTGTATTAATTAACTAACACCTTGTTTGGTCAAGTGTAGACTCCGTACAAAGAGAAAAGACGCTTGTGTAAATCATTTATATACAATACTTGATATGATAATTTATTATATTGGGGATAATATTATATTTCATTGATTTTTCTACCAAGGCCCAAGTTAtatgttctgtttttatattttcatcttATATTGCGACAGTTTGTATTATTCCAGaaaaaattaaactttttattCAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039790743.1 True 3999 mRNA 0.46 9 29125214 29147661
XM_039790744.1 False 3648 mRNA 0.45 7 29125214 29147658

Neighbor

gene id symbol gene type direction distance location
LOC120552600 NA coding downstream 12921 28377079 ~ 29112293 (-)
dnah5l LOC103377303,LOC103367559 coding downstream 31009 28930231 ~ 29094205 (-)
LOC120552567 NA coding downstream 769567 28303334 ~ 28355647 (-)
LOC120552593 NA coding downstream 1812849 27310012 ~ 27312365 (-)
LOC120552591 NA coding downstream 1900222 27223754 ~ 27224992 (-)
LOC120552587 hus1 coding upstream 3773 29151434 ~ 29161971 (-)
dnph1 NA coding upstream 455441 29603102 ~ 29610341 (-)
LOC120552739 NA coding upstream 481644 29629305 ~ 29672772 (-)
inhbaa inhba,LOC104934797,LOC102293179,LOC101479519 coding upstream 598847 29746508 ~ 29750259 (-)
eci2 eci2 coding upstream 714141 29861802 ~ 29895595 (-)
G223808 NA non-coding downstream 196703 28908041 ~ 28928511 (-)
G223700 NA non-coding downstream 222783 28862375 ~ 28902431 (-)
G223798 NA non-coding downstream 272364 28850663 ~ 28852850 (-)
G223692 NA non-coding downstream 350967 28708699 ~ 28774247 (-)
G223694 NA non-coding downstream 364004 28667074 ~ 28761210 (-)
G223851 NA non-coding upstream 16295 29163956 ~ 29165000 (-)
G223852 NA non-coding upstream 16985 29164646 ~ 29167677 (-)
G223870 LOC107105063 non-coding upstream 190592 29338253 ~ 29339662 (-)
G223873 NA non-coding upstream 200913 29348574 ~ 29354881 (-)
G223876 NA non-coding upstream 208958 29356619 ~ 29357892 (-)
LOC120552566 NA other downstream 278961 28781890 ~ 28846253 (-)
G223686 LOC100697526 other downstream 607288 28011028 ~ 28517926 (-)
G223746 NA other downstream 929789 28176365 ~ 28195425 (-)
G223681 NA other downstream 1209381 27897134 ~ 27915833 (-)
G223646 fars2,LOC102791206 other downstream 1329363 27756346 ~ 27795851 (-)
LOC120552583 NA other upstream 153029 29300690 ~ 29319934 (-)
LOC120552608 NA other upstream 332148 29479809 ~ 29543351 (-)
G223911 NA other upstream 402734 29550395 ~ 29563368 (-)
LOC120552738 yipf3,LOC106605823 other upstream 464331 29611992 ~ 29620659 (-)
G223897 NA other upstream 564353 29712014 ~ 29746456 (-)

Expression


Co-expression Network