LOC120552579


Basic Information

Item Value
gene id LOC120552579
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 27195330 ~ 27205153 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039790756.1
tgtaatttttgacATTACATACCCGCATCAACAGTCCATCTTGACCCAGACTCGAAACGTTTTCCATACTTCCTTCGTCCATCACAGTTGCAACTAACTCCAGGAAATCTGTCACAGAACATGTACATGTCAGAACATAGCAGCTCCAGCTTAAACTTTCCACCTTCTTCCTTTTTCCATCCGTCTGTGGTTGGTCAAAACTCTCTGCCTGTCTATTCTGACCATGAACAGCCTTTAGATGTATCTACCAGAAGAACAAAAGACAGCAATGTTCCCCTTATATTGCACCCTCAACTAAGTCAAATAACTTCTAAAAAGAACAAGATCTGGAGCAAATAGCTCACCAGACATGCCTTTAAAACAAATCTCTGGGGAACTGTATTCTCTTAAGTCATCTTTTAAGTCCCTTAAATCTGGGAAATATATTTGCAGAGGCCCCTGCTTCAGAAAAAGGAAACTACATGAGAAAGATTCCCTTATTATTGCTTGTACCAGTGATCTCCCTGACTACAATTGTTGTCAAACTTCTGGTTCAATCACAGAAACatgaatgacaaaaaatgcaGAAGGTTCTACATACATAGCCCCAAATTTAGCTGCCCCTCTAGATCAAATACAAATACCCACGAACGATCCCTGGGTTACTGTCTGCACTGAAAGAAGCAGAACAAAAGATGCATTTCAGCTTTCGTCTGAAAGCGAAACCAATAGGTGAAAGTGATGCCCCGATGGAAAAAGGAGGCACCTGTTACAGCTGTTCCTTCCAACCTTCAGTATCTCACCAACCCCTCTGGAGACCATGTTTGTGATGAAATTTTAAGCTTATTTGACATTGAGTTGCCTGATATGGTTAGCCTGAGCCAATATAGTTTACTAAATGACTGTGCTGGCCAGAACACTTCCTCTTTTTCTGTTCAATACGATGATCGTAGATCTCCTTTATCAGTccgttttttacattttatgaaaGGAAAATACTCAGATGATGAAGGCCCCAACTTTTCTAACTCTAATTCTACTGTCAATATACAAACCTGCTCTCTCCAAATGGAGGCACCTAATACAGCTGTGCAAACAGAAACTCATGTTTTTATAAACATCACAGGGTTTTCTGGTTTCGATAATGTCAAGGATGAAGATTCACCACCTGACCTGGTCCGAGCGCTGGTTCTGCTGTTCTACAGGCCCCCAGCTGACCCTGATCCTGAATCCCTCCTCAATGTGTTGTTGCTACCGAGGAACGTTGTTCTCCGGGATGTGCAGCGCATCAGGAAGAAGTTAGCTGGAGATGATAGCTACATAGTGACCCCCCACACTTTAAACTGCACCCACAGCAGGAATATTCTCTGTCTACTTGTCCTGAAGACGACTCAGTTCTAGTTCAACCGACAGAAGCAGAGTTTGACTGTGACAACTTCTTCCCATCATTCCAGGTGAGCTTAGAAACAATAATGAAACACATTAAGCTGTTTTTGAGGGACACCAACAGCTCCCAGTGTCTGGGAAAGACGAGTTTGTCTATCATCCACTGGAGTAAGAAGGCCCTGTGGGCCGAGCGACGTGAATCTCTGTCCAAGGACCTGTTCTCAAAAGTCTGCTGGACAAACTGTTGGAGAAAAAGGTGATGGCTGATCCTGAGAGGGAGTCAGCGGACTCGAAGAAAAACTTAAAGATGGATCCCAATCTCATGTCTGTGTATTGAGAACTGAGCTACAGTCAGGATGTAGTTGATCATTTAGACTAGAGGCAGCTTTGATGGAGTTAGACTTATAAAATACAATAGTGTCAGTAGTCATGTAGTCAGTAGTCAACAGGCAGAGACTTGATTTCCCTGAAACATGTTGACATAACACAGGTAGAAAAACATGTTATACAATGTGGAGGGTGTGGAGACAAAACGTAATCAGTGTGGAAACACAATGACAGAGAACGTCCGTGTTTGATAAAGAAGGGCTCAGCATTCAATGCGATATTTAGAATATAAAACGTTTGAAGAATCAAGTAATAACACACAGCTTGTGTGTTCATCCAGCCACAACACGGggTATGTGAGCAAGTAAAACACTGAGGAGCCAAAAAGAATAGAGTGGataaacaattaaaacaaaaaattattgtaatagcctattagaTGTCAAAAAAGGGAATTGAATTTAATCTGTGGCTGAAGAAGGAAGTCGAGAcaaaagagaaaacacagaaaaaggaATAACCAAAATGAACACATAGGTCTCACGAAGTGTCCAGAAAGTCAGATTTTTGACAGACACAAGCACGGAGATCTCCTGACTTCTGTTGCTCATTGAGCTCCACTGACTCGGATCGTGACCTTCATGAACGCAGCAAAATGGCGTCTGCTGCGAAAcatgaaagaagagaaagagaagaatcATGTTTCAGCAGATCAGCCAGAAGTATCAGGAGAGCTCTGTCCAGGATTTGCAGAGGTAGAGATAATTCTCCCCCTGACACCATAGACTTTCCGCTCTCTGAAACACCAAATCTACTTAACTCAATGCATGTTTGCGATGGGGGTAATACTAGATACCAGCTTGACAGGGAAGACGAGGTAcctctgtgtttgttttctccttCCCCCTCTCAGCTGGAAACTGATGGTGGCCTCAGCTCAGTCACAAATGTTGCTGCCCCTCCTGAACAATGCAACACCCAAGATGCATTTCAGCTTTCGTCTGTGAAGTCTGGAAGCAAATCTATAAGTGACATTGATGCTCCGATGGAAATGGAGGCACCTGTTACATCTGTGAACTATTCAGTCACAAACACCCTGCCAGCCCATTCTCTCCTCCAAATCTTCTCCTCAGATCCTGGTTGGAGTAGAAGAGACTCCAGCTGCCTGCCTCGTTCTCCCAGCATGCCTTCACTGAGTCAAATAACCTCTGAAAAGAACAAGACCTTAACACGAGTTGAAAGCTTACCTGAGATTCTGTTAAAAACCAGCTTTGAGGAGTTTACACCTGATATCACTGCTGATGAAAGCGATGAAACCTACAGGTTCCAGTGCTCCTGCCCAGGCCTGTACCAGTGCAGTGTGACCGGCCTGGTGTTCAACATGGAGGGAGAAGGGGACGTGGTCTACAGGACTGTCCCTTGGAACAGGAGGCTACTGGCCCAGCATCACAAGAAGCCTGCAGGACCCCTGTTTGACATCCAATGTCCGCAGCAGTCGGTGTGTCAGCTTCATCTCCCACATTGTGAGATCCGCTCCACAGGTGGATGTGATTTCTTGTCAGTTGCTCATGTGAACGATGAAGGCATTGAGTTTATCAGCCCTCATAGGATAACAGAAACTCATGTTTTTACAAACATCACAGGGTTTTATGGTTTTGGTAATGTCAAGGATGAAGATTCACCACCTGACCTGGTCCGAGCGCTGGTTCTGCTGTTCTACAGGCCCCCAGCTGATCCTGATCTTAGATCCATCCTCAATGTGTTGTTGCTACCAAGGAACATTGTTCTCCGGGATGTGCTGGGCATTCGGAAGGAGTTATTTGCAGATGAGAACTACATAGAGACATCCTCACACTGTAAACTGCACCCATATCAGGAATACACTCTGTCCACTTGTCCTGAAGACGACTCAGTTCTAGTTCAACCAACAGAAGCAGAGTTTGACTGTGACAACTGTGACAACTTCTTGCCATCATTTCAGGTGAGATTAAAAACAATCCTTACAGACATTAACCTGTTTTTGAGAGACACCAACAGCTCCAACAGTGTCTGGGAAAGAGAGGTTAGTCTTTCCACCACCAGAGTAAGAAGGTCCTGTAGGCCGAGCGCTGTAAGTTCTAATGACAGGCTGTTTGCGATGCGGAGCAGCTTCATCGATGGGATATCAGGACCTGTTCTCAAAAGTCTGCTGGACAAACTTTTGGAGAAAAAGGTGATGGCTGATTCTGAGAGGGAGTCAGCGGACTCGatgaaaaacacaagagacaaaGCTCGTTTTGTTGTCGACACAGTGAGGAAGAAAGGTGAAGCTGCTAGTTCAGAGATGATTGAGTTCCTCTGTGATGCTGACCCGTTTCTCTGTAAACATCTTGGGTTGATCTGAAGCTAAATGAACAGGTGATGCATTCAGTTTAAGAGTATTTTCTGCAAGAGACCATGAACACAATAGCCCAGTTTCTTCATAAAAGTGCATTTGTATCTGatcaaatgttaaaatataagAGCTAAATAGTAGGCCTCTAATAGTGCAGCTGGTTAGTTAAATTGGGTTTCCGGTTGATGATGCTGTGTGAACTACTTTTTCTTCGGGGAATCTCCCTGAGCTGTTTTTACAGACTGAACATGAGAGGAAACTGTGAAGATGTTTAGAGCCACCTGCTGGCTGACATGAGTTACTGTAAACTGTTGatgccattttattttacaggaTGTTGGAGATTAAGTAGCTCTTGTTCACAAAAGTTCCATTTGGTGGCTCCTTTGGAGCTTCTGATTGTATCaagtaaatgtttaaatgtccATTTCCTTAAGTCCTTTAAATGGATAGTCcagctctcttcaaagccaccagactccttgtgaattctttgtgttgtaaactcagtggccctcatttatcattCTTGCGTAGAAACGGGCGTATATGTTGGCGTAAGATTATGCTTACACTCCTCTCACCGCCTGATTTATGAAGCTGTGCGTACCTTTGAAATCCAGGTGTACGCAATACCTGCCCTTGATAAATGCCGCGGCTGAAAACGATCGTCATTAGAATaacacgccccaatatattctgggttttgaggcctcgcccctacaatttacga
>XM_039790757.1
tgtaatttttgacATTACATACCCGCATCAACAGTCCATCTTGACCCAGACTCGAAACGTTTTCCATACTTCCTTCGTCCATCACAGTTGCAACTAACTCCAGGAAATCTGTCACAGAACATGTACATGTCAGAACATAGCAGCTCCAGCTTAAACTTTCCACCTTCTTCCTTTTTCCATCCGTCTGTGGTTGGTCAAAACTCTCTGCCTGTCTATTCTGACCATGAACAGCCTTTAGATGTATCTACCAGAAGAACAAAAGACAGCAATGTTCCCCTTATATTGCACCCTCAACTAAGTCAAATAACTTCTAAAAAGAACAAGATCTGGAGCAAATAGCTCACCAGACATGCCTTTAAAACAAATCTCTGGGGAACTGTATTCTCTTAAGTCATCTTTTAAGTCCCTTAAATCTGGGAAATATATTTGCAGAGGCCCCTGCTTCAGAAAAAGGAAACTACATGAGAAAGATTCCCTTATTATTGCTTGTACCAGTGATCTCCCTGACTACAATTGTTGTCAAACTTCTGGTTCAATCACAGAAACatgaatgacaaaaaatgcaGAAGGTTCTACATACATAGCCCCAAATTTAGCTGCCCCTCTAGATCAAATACAAATACCCACGAACGATCCCTGGGTTACTGTCTGCACTGAAAGAAGCAGAACAAAAGATGCATTTCAGCTTTCGTCTGAAAGCGAAACCAATAGGTGAAAGTGATGCCCCGATGGAAAAAGGAGGCACCTGTTACAGCTGTTCCTTCCAACCTTCAGTATCTCACCAACCCCTCTGGAGACCATGTTTGTGATGAAATTTTAAGCTTATTTGACATTGAGTTGCCTGATATGGTTAGCCTGAGCCAATATAGTTTACTAAATGACTGTGCTGGCCAGAACACTTCCTCTTTTTCTGTTCAATACGATGATCGTAGATCTCCTTTATCAGTccgttttttacattttatgaaaGGAAAATACTCAGATGATGAAGGCCCCAACTTTTCTAACTCTAATTCTACTGTCAATATACAAACCTGCTCTCTCCAAATGGAGGCACCTAATACAGCTGTGCAAACAGAAACTCATGTTTTTATAAACATCACAGGGTTTTCTGGTTTCGATAATGTCAAGGATGAAGATTCACCACCTGACCTGGTCCGAGCGCTGGTTCTGCTGTTCTACAGGCCCCCAGCTGACCCTGATCCTGAATCCCTCCTCAATGTGTTGTTGCTACCGAGGAACGTTGTTCTCCGGGATGTGCAGCGCATCAGGAAGAAGTTAGCTGGAGATGATAGCTACATAGTGACCCCCCACACTTTAAACTGCACCCACAGCAGGAATATTCTCTGTCTACTTGTCCTGAAGACGACTCAGTTCTAGTTCAACCGACAGAAGCAGAGTTTGACTGTGACAACTTCTTCCCATCATTCCAGGTGAGCTTAGAAACAATAATGAAACACATTAAGCTGTTTTTGAGGGACACCAACAGCTCCCAGTGTCTGGGAAAGACGAGTTTGTCTATCATCCACTGGAGTAAGAAGGCCCTGTGGGCCGAGCGACGTGAATCTCTGTCCAAGGACCTGTTCTCAAAAGTCTGCTGGACAAACTGTTGGAGAAAAAGGTGATGGCTGATCCTGAGAGGGAGTCAGCGGACTCGAAGAAAAACTTAAAGATGGATCCCAATCTCATGTCTGTGTATTGAGAACTGAGCTACAGTCAGGATGTAGTTGATCATTTAGACTAGAGGCAGCTTTGATGGAGTTAGACTTATAAAATACAATAGTGTCAGTAGTCATGTAGTCAGTAGTCAACAGGCAGAGACTTGATTTCCCTGAAACATGTTGACATAACACAGGTAGAAAAACATGTTATACAATGTGGAGGGTGTGGAGACAAAACGTAATCAGTGTGGAAACACAATGACAGAGAACGTCCGTGTTTGATAAAGAAGGGCTCAGCATTCAATGCGATATTTAGAATATAAAACGTTTGAAGAATCAAGTAATAACACACAGCTTGTGTGTTCATCCAGCCACAACACGGggTATGTGAGCAAGTAAAACACTGAGGAGCCAAAAAGAATAGAGTGGataaacaattaaaacaaaaaattattgtaatagcctattagaTGTCAAAAAAGGGAATTGAATTTAATCTGTGGCTGAAGAAGGAAGTCGAGAcaaaagagaaaacacagaaaaaggaATAACCAAAATGAACACATAGGTCTCACGAAGTGTCCAGAAAGTCAGATTTTTGACAGACACAAGCACGGAGATCTCCTGACTTCTGTTGCTCATTGAGCTCCACTGACTCGGATCGTGACCTTCATGAACGCAGCAAAATGGCGTCTGCTGCGAAAcatgaaagaagagaaagagaagaatcATGTTTCAGCAGATCAGCCAGAAGTATCAGGAGAGCTCTGTCCAGGATTTGCAGAGGTAGAGATAATTCTCCCCCTGACACCATAGACTTTCCGCTCTCTGAAACACCAAATCTACTTAACTCAATGCATGTTTGCGATGGGGGTAATACTAGATACCAGCTTGACAGGGAAGACGAGGTAcctctgtgtttgttttctccttCCCCCTCTCAGCTGGAAACTGATGGTGGCCTCAGCTCAGTCACAAATGTTGCTGCCCCTCCTGAACAATGCAACACCCAAGATGCATTTCAGCTTTCGTCTGTGAAGTCTGGAAGCAAATCTATAAGTGACATTGATGCTCCGATGGAAATGGAGGCACCTGTTACATCTGTGAACTATTCAGTCACAAACACCCTGCCAGCCCATTCTCTCCTCCAAATCTTCTCCTCAGATCCTGGTTGGAGTAGAAGAGACTCCAGCTGCCTGCCTCGTTCTCCCAGCATGCCTTCACTGAGTCAAATAACCTCTGAAAAGAACAAGACCTTAACACGAGTTGAAAGCTTACCTGAGATTCTGTTAAAAACCAGCTTTGAGGAGTTTACACCTGATATCACTGCTGATGAAAGCGATGAAACCTACAGGTTCCAGTGCTCCTGCCCAGGCCTGTACCAGTGCAGTGTGACCGGCCTGGTGTTCAACATGGAGGGAGAAGGGGACGTGGTCTACAGGACTGTCCCTTGGAACAGGAGGCTACTGGCCCAGCATCACAAGAAGCCTGCAGGACCCCTGTTTGACATCCAATGTCCGCAGCAGTCGGTGTGTCAGCTTCATCTCCCACATTGTGAGATCCGCTCCACAGGTGGATGTGATTTCTTGTCAGTTGCTCATGTGAACGATGAAGGCATTGAGTTTATCAGCCCTCATAGGATAACAGAAACTCATGTTTTTACAAACATCACAGGGTTTTATGGTTTTGGTAATGTCAAGGATGAAGATTCACCACCTGACCTGGTCCGAGCGCTGGTTCTGCTGTTCTACAGGCCCCCAGCTGATCCTGATCTTAGATCCATCCTCAATGTGTTGTTGCTACCAAGGAACATTGTTCTCCGGGATGTGCTGGGCATTCGGAAGGAGTTATTTGCAGATGAGAACTACATAGAGACATCCTCACACTGTAAACTGCACCCATATCAGGAATACACTCTGTCCACTTGTCCTGAAGACGACTCAGTTCTAGTTCAACCAACAGAAGCAGAGTTTGACTGTGACAACTGTGACAACTTCTTGCCATCATTTCAGGTGAGATTAAAAACAATCCTTACAGACATTAACCTGTTTTTGAGAGACACCAACAGCTCCAACAGTGTCTGGGAAAGAGAGGTTAGTCTTTCCACCACCAGAGTAAGAAGGTCCTGTAGGCCGAGCGCTGTAAGTTCTAATGACAGGCTGTTTGCGATGCGGAGCAGCTTCATCGATGGGATATCAGGACCTGTTCTCAAAAGTCTGCTGGACAAACTTTTGGAGAAAAAGGTGATGGCTGATTCTGAGAGGGAGTCAGCGGACTCGatgaaaaacacaagagacaaaGCTCGTTTTGTTGTCGACACAGTGAGGAAGAAAGGTGAAGCTGCTAGTTCAGAGATGATTGAGTTCCTCTGTGAGGCAGACCCGTTTCTCTGTGAACATCTTGGGTTGATCTGAAGCTAAATGAACAAGATCATGCAGAACATGTTGACCTGGTAGTGTTAAAGTGATCATTCTGTAACTCCCACAAATGTTGCCCTTCAACAGTAACTGTACTTGAACTTTCCTTGACAaagtgaaaaaggaaaaaaaagtacataGCTCAGGCCTAAGGCAATTATGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039790756.1 True 4799 mRNA 0.44 2 27199401 27205153
XM_039790757.1 False 4242 mRNA 0.44 3 27195330 27205153

Neighbor

gene id symbol gene type direction distance location
LOC120552735 nebl coding downstream 5786 27136771 ~ 27189544 (-)
LOC120552734 nebl coding downstream 65936 27046827 ~ 27129394 (-)
LOC120552564 nebl coding downstream 140970 26987325 ~ 27054360 (-)
LOC120552563 NA coding downstream 214456 26972847 ~ 26980874 (-)
ssr1 ssr1,LOC104966062 coding downstream 226916 26945450 ~ 26968414 (-)
LOC120552591 NA coding upstream 18601 27223754 ~ 27224992 (-)
LOC120552593 NA coding upstream 104859 27310012 ~ 27312365 (-)
LOC120552567 NA coding upstream 1098181 28303334 ~ 28355647 (-)
LOC120552600 NA coding upstream 1171926 28377079 ~ 29112293 (-)
dnah5l LOC103377303,LOC103367559 coding upstream 1725078 28930231 ~ 29094205 (-)
G223517 NA non-coding downstream 47323 27044837 ~ 27148007 (-)
G223534 NA non-coding downstream 107133 27087733 ~ 27088197 (-)
G223518 NA non-coding downstream 135826 27005323 ~ 27059504 (-)
G223515 NA non-coding downstream 203580 26982784 ~ 26991750 (-)
G223522 NA non-coding downstream 218036 26976478 ~ 26977294 (-)
G223552 NA non-coding upstream 48345 27253498 ~ 27254197 (-)
G223551 NA non-coding upstream 50707 27255860 ~ 27264163 (-)
G223554 NA non-coding upstream 62095 27267248 ~ 27267746 (-)
G223555 NA non-coding upstream 70138 27275291 ~ 27277548 (-)
G223559 NA non-coding upstream 70595 27275748 ~ 27299292 (-)
G223516 LOC107098890,LOC106903449,LOC105416179,LOC103369801,LOC107756860,LOC108228419 other downstream 7112 27104598 ~ 27188218 (-)
LOC120552733 LOC100703031,LOC102297688,LOC106527684,LOC106916028,LOC104953541,LOC106590371,LOC101467375 other downstream 288998 26559435 ~ 26906332 (-)
LOC120552560 NA other downstream 685203 26483929 ~ 26510127 (-)
G223435 NA other downstream 719419 26471704 ~ 26475911 (-)
G223433 NA other downstream 785973 26404001 ~ 26409357 (-)
LOC120552569 NA other upstream 53220 27258373 ~ 28498012 (-)
rreb1a rreb1 other upstream 310807 27515960 ~ 27625569 (-)
G223640 NA other upstream 435411 27640564 ~ 27685979 (-)
LOC120552596 NA other upstream 489187 27694340 ~ 27700381 (-)
G223645 NA other upstream 533629 27738782 ~ 27739972 (-)

Expression


Co-expression Network