LOC120552591


Basic Information

Item Value
gene id LOC120552591
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 27223754 ~ 27224992 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039790772.1
ATATAAATGAGCAACCATCTTTAAGCCTTTATATTCATCTCTGTTGAGACAACGCTGCTGGGAGAAGATGGCTTCATTTTTTGCTGGTCCTGATTTGAGAATCGTGATGATTGGAAAAACTGGTGTGGGCAAGAGTGCTGTTGGAAACACCATTCTGGGAGAGAAATGTTTCAAATCCCGTCCCAGTTCAGAGTCAGTGACTGAGACCTGTGACAAAGGTGAGACACGCTGGGGTAACAGAGTGGTTAGTGTGGTAGACACACCAGGGATCCTGGACACTGAGACATCTCCAGAATTCATCCAAAGAGAAATTATGAAATGCGTGGAAGTCTCATGTCCTGGTCCTCATGTGTTCCTGCTGGTACTCCAAGTCGGTCGATTCACCAACGAAGAGAAAAACTCTGTGGAAGCCCTGCAAGCGCTGTTTGGTCCTACAGCTAACCAGTACATGATCGTGCTGTTTACCCGTGGTGGTGATCTTGGAGACATGAAAATACAACAGTATGTGCGTGAGGGCAGTCAAGACCTTCAACGAGTCATCCAAAGCTGTGGTAACAGGTACCATGTCATTGACAACACCAGTAAAGACAGAAGTCAAGCAGTGAAACTGATCAAGAAGATTGATGACATGGTTGCAGGAAACGGGGGGGCATACTACACAGATGCCATGTATCAAGAAGTGCATCGACAAATGGGAAGTGGAGGTACTCCCTCATACAGCTTTCTCGGTGCACTGTTCCAGCGTACTGTAAAATTCATAAAAATTATTGCTAGTCGCTAAATAACCATAATCAGTAGCCTAAACATATTATCAATATCCAGTTAAAACTAGACGGCTTCTGTACCCGTGTGTGAACATaaggaatacattttaaaatctttgacacacacacacacacacacttacagtagATAGTGTAGTGCTATTTTGTGTGGATTGAAGCCATAATGACAAAAATACATGTACCAACAACTGCAACACGGAGACTATGATGAGTCCAACAtctaattaaaaatgtttaatgttgacGTGAATGTTTATACACAATGTTATACAGGATTTTATACACATACTCATATATACTCATACA

Function

GO:

id name namespace
GO:0005525 GTP binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039790772.1 True 1091 mRNA 0.42 2 27223754 27224992

Neighbor

gene id symbol gene type direction distance location
LOC120552579 NA coding downstream 18601 27195330 ~ 27205153 (-)
LOC120552735 nebl coding downstream 34210 27136771 ~ 27189544 (-)
LOC120552734 nebl coding downstream 94360 27046827 ~ 27129394 (-)
LOC120552564 nebl coding downstream 169394 26987325 ~ 27054360 (-)
LOC120552563 NA coding downstream 242880 26972847 ~ 26980874 (-)
LOC120552593 NA coding upstream 85020 27310012 ~ 27312365 (-)
LOC120552567 NA coding upstream 1078342 28303334 ~ 28355647 (-)
LOC120552600 NA coding upstream 1152087 28377079 ~ 29112293 (-)
dnah5l LOC103377303,LOC103367559 coding upstream 1705239 28930231 ~ 29094205 (-)
LOC120552571 NA coding upstream 1900222 29125214 ~ 29147661 (-)
G223517 NA non-coding downstream 75747 27044837 ~ 27148007 (-)
G223534 NA non-coding downstream 135557 27087733 ~ 27088197 (-)
G223518 NA non-coding downstream 164250 27005323 ~ 27059504 (-)
G223515 NA non-coding downstream 232004 26982784 ~ 26991750 (-)
G223522 NA non-coding downstream 246460 26976478 ~ 26977294 (-)
G223552 NA non-coding upstream 28506 27253498 ~ 27254197 (-)
G223551 NA non-coding upstream 30868 27255860 ~ 27264163 (-)
G223554 NA non-coding upstream 42256 27267248 ~ 27267746 (-)
G223555 NA non-coding upstream 50299 27275291 ~ 27277548 (-)
G223559 NA non-coding upstream 50756 27275748 ~ 27299292 (-)
G223516 LOC107098890,LOC106903449,LOC105416179,LOC103369801,LOC107756860,LOC108228419 other downstream 35536 27104598 ~ 27188218 (-)
LOC120552733 LOC100703031,LOC102297688,LOC106527684,LOC106916028,LOC104953541,LOC106590371,LOC101467375 other downstream 317422 26559435 ~ 26906332 (-)
LOC120552560 NA other downstream 713627 26483929 ~ 26510127 (-)
G223435 NA other downstream 747843 26471704 ~ 26475911 (-)
G223433 NA other downstream 814397 26404001 ~ 26409357 (-)
LOC120552569 NA other upstream 33381 27258373 ~ 28498012 (-)
rreb1a rreb1 other upstream 290968 27515960 ~ 27625569 (-)
G223640 NA other upstream 415572 27640564 ~ 27685979 (-)
LOC120552596 NA other upstream 469348 27694340 ~ 27700381 (-)
G223645 NA other upstream 513790 27738782 ~ 27739972 (-)

Expression


Co-expression Network