LOC120552593


Basic Information

Item Value
gene id LOC120552593
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 27310012 ~ 27312365 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039790775.1
GGATAAGCAACTGTATATAAGAGGCATGTTTTCTCCTGTTAGATACTTCTGTGACACTGCAAAGGAAGAAGATCATTTTGCAAAAGGTCGCCTTCATCAACTTCTCCATGAAGATGCTAGCTGTGTCCGTACTTGTTGCAGCCATGATGGCTCTGACTACTGTTCTTCCAGAGGCAGAGGCCGCTGCTGTGGGAGGACAAACAATTCAACCAAGAGAAGATCATGTTGTCAAGAGGTCCACACACTGTGAAAATGGTTGGTCTGTGTACGGAGGCCGCTGTTTCCGCTACTTCCCAGGATCCACCAGCTGGGCTGTGGCTGAGAGATCCTGTCGCGCTTCACACGCACACCTAGCATCTGTGCACAACAGAGATGAGGAACATTGGATTCAGCATTTGGCAGGCCACAAGTTGGCATGGATCGGAGGCTCTGATGCACAACAGGAGGGATTTTGGTTCTGGTCTGATGGTACACATTTCAACTATGTCAACTGGTGTGGAGGAGAGCCTAATAACAGCAGAGGTCAGCACTGTCTACAAATCAATTACTCAGATCATAAGTGCTGGGACGACGACAACTGCAATGTTGGGAGAGGATTTGTCTGTGTCAAGAAACAAGGATGATTCCTGCACCAACACAGAGGCATGAAGTAGGGCTACTTACCATGATGCGCAAACATTGGAAGATGTGCGTTTGTGTCCATGTTTGTGTCCTCATCTGTATTTGTGTCTTCAGTCTCATCCATAACCTAAAGTCTTTAACTCTCTAATCAAATATTTCTTAGCTATCGCTGTAACGCTACTCAAGGAAAGAGGTGACAAGTGACATAAACAGGAGCTGTTTCTTAGGGCCTTGTGCTTTAAAGAGCAGATTGAATGGTTATGGAAAGGATGCTTTATGCCTATTAAGTCTATTCTTCAGTGATTTGTCTTTCTTGTATCATGCATAATTAAAAGGCTCAAGCATTGAAACAA

Function

GO: NA

KEGG:

id description
ko05322 Systemic lupus erythematosus

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039790775.1 True 974 mRNA 0.45 7 27310012 27312365

Neighbor

gene id symbol gene type direction distance location
LOC120552591 NA coding downstream 85020 27223754 ~ 27224992 (-)
LOC120552579 NA coding downstream 104859 27195330 ~ 27205153 (-)
LOC120552735 nebl coding downstream 120468 27136771 ~ 27189544 (-)
LOC120552734 nebl coding downstream 180618 27046827 ~ 27129394 (-)
LOC120552564 nebl coding downstream 255652 26987325 ~ 27054360 (-)
LOC120552567 NA coding upstream 990969 28303334 ~ 28355647 (-)
LOC120552600 NA coding upstream 1064714 28377079 ~ 29112293 (-)
dnah5l LOC103377303,LOC103367559 coding upstream 1617866 28930231 ~ 29094205 (-)
LOC120552571 NA coding upstream 1812849 29125214 ~ 29147661 (-)
LOC120552587 hus1 coding upstream 1839069 29151434 ~ 29161971 (-)
G223563 NA non-coding downstream 8494 27300876 ~ 27301518 (-)
G223559 NA non-coding downstream 10720 27275748 ~ 27299292 (-)
G223555 NA non-coding downstream 32464 27275291 ~ 27277548 (-)
G223554 NA non-coding downstream 42266 27267248 ~ 27267746 (-)
G223551 NA non-coding downstream 45849 27255860 ~ 27264163 (-)
G223578 NA non-coding upstream 47457 27359822 ~ 27364272 (-)
G223579 NA non-coding upstream 48109 27360474 ~ 27365071 (-)
G223585 NA non-coding upstream 110053 27422418 ~ 27438870 (-)
G223587 NA non-coding upstream 112364 27424729 ~ 27451993 (-)
G223608 NA non-coding upstream 216035 27528400 ~ 27584765 (-)
G223516 LOC107098890,LOC106903449,LOC105416179,LOC103369801,LOC107756860,LOC108228419 other downstream 121794 27104598 ~ 27188218 (-)
LOC120552733 LOC100703031,LOC102297688,LOC106527684,LOC106916028,LOC104953541,LOC106590371,LOC101467375 other downstream 403680 26559435 ~ 26906332 (-)
LOC120552560 NA other downstream 799885 26483929 ~ 26510127 (-)
G223435 NA other downstream 834101 26471704 ~ 26475911 (-)
G223433 NA other downstream 900655 26404001 ~ 26409357 (-)
rreb1a rreb1 other upstream 203595 27515960 ~ 27625569 (-)
G223640 NA other upstream 328199 27640564 ~ 27685979 (-)
LOC120552596 NA other upstream 381975 27694340 ~ 27700381 (-)
G223645 NA other upstream 426417 27738782 ~ 27739972 (-)
G223665 fars2 other upstream 438340 27750705 ~ 27754334 (-)

Expression


Co-expression Network