LOC120552600


Basic Information

Item Value
gene id LOC120552600
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 28377079 ~ 29112293 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039790787.1
GAATCCAGTGTAAATGAGGACAAGCTTTTCTGCAGCGTGTTCAAACATTTCCCCAGCGGAGCtgatcagagagagaggagtgtgtTTGAGTGCTGGCTCTCATAGAGGTCTATTTGAAAATGGCCCACTCACTTTTGTACTGGCCCGCCCAAAATACTATTTCAGTCTACAGAGCAGGGCGAGGAAACTGAAGGCTGAGGCAGTACTAACTTCAGATCAGAAGATGAGTgatttggaggaagaggagtatGCACTAAAGTCTGTAGTATCTAGCTGTCAGTCAGTGAAGAGTGACCGGTCCATAGATCTACCTCCAGACTTCAGTGATGAATCtggaccctcagacacaaaACTGACTCCAGATCAGAAGATGAGTGATGTCGaggtagaggaggagagagtaGAGTCTGAAGGATCTGACTGTCAGTCTACGAAGAGTGACTGGTCCAAAGGTCTTCCTGAAGACTTCAGTAAAgaacctggaccctcagacacaaaACTGACTTCAGATCAGAAGATGAGTGATTTGGAGAGGATTCTTCAATTCAGTAAAgaacctggaccctcagacacTAAAGTCCAGAACAAGAGATGGGGAGCAGAGTCTGTAGTATCTGGCTGTCAGTCTATGAAGAGTGACCGGTCCAATGATCTTCCTGAAGACTTCAGTAAAgaacctggaccctcagacacaaaACTGACTTCAGATCAGAAGATGAGTgatttggaggaagaggaggacggaGCAGAGTCTGTAGTATCTGGCTGTCAGTCTATGAAGAGTGACCGGTCCGTAGGACAGCCTCTATACTTTAGTACTgaacctggaccctcagacacaaaACTGACTTCAGATCAGAAGATGAGTgatttggaggaagaggaggacggaGCAGAGTCTGTAGTATCTGGCTGTCAGTCTATGAAGAGTGACTGGTCCATAGGACAACCTCTATACTTCAGTACTgaacctggaccctcagacacaaaACTGACTTCAGATCAGAAGATGAGTgatttggaggaagaggaggatggagcAGAGTCTGTAGAATCTGGCTGTCAGTCTATGAAGAGTGACTGGTCCGTAGGACAGCCTCTATACTTCAGTACTgaacctggaccctcagacacaaaACTGACTTCAGATCAGAAGATGAGTgatttggaggaagaggaggacggaGCAGAGTCTATAGTATCTGGCTGTCAGTCTATGAAGAGTGACTGGTCCATAGGACAACCTCTATACTTCAGTACTgaacctggaccctcagacacaaaACTGACTTCAGATCAGAAGATGAGTgatttggaggaagaggaggatggagcagagtctgtagtatctgtctgtcagtctaTGAAGAGTGACTGGTCGATGCAAGAACCTCCATACTTCAGTAAAgaacctggaccctcagacacaaaACTGACTTCAGATCAGAAGATGAGTGAtttggaggaagagaaggatggagcagagtctgtagtatctgtctgtcagtctaTGAAGAGTGACTGGTCGATGCCAGAACCTCCATACCTCAGTAATAAACCTGGACCATCAGACCCAAAAACGAGTGAGAGGAGTGATGTTTGTGAGGAGGAGCGCCCGTCCTGCTGTGCTTTGTGTCAGGACGTCCTGAAGGATCCAGTCTCTACCAGCTGTGGACTCTGGTTCTGCAGACAGTGCATCACCTCATACTGGGACCAGTCTGCTTCATCAGGGGACTCCTGCTGTCCCCAGTGTGGAGAAAGATCCAGAACAATGTACGttgttaaacataaacataagatCAGTGTGAAGGGGACATATGAACGTGTGACTGAAGGAGCTGatcaaacaggaagtggaaccCTCCTCAACAGGATCTTCACTGCGCTCTACATCACAGATGAACTGAGTGAAGAAGTTAATACCCAACATGAGGTGAGGCAGCTCGAGACAGCTTCCAAGATGAAGACCCTCCATGACTCTCCAATCGAGTGCAGCGACATCTTTAAAGCCTTACCTGaccaacagaaacacatcagaGTCGTTATGATGATCGGCGTCGCTGGCGTTGGAAAAACCTTCTCAGTGCAGAAGTTCTGTCTGGACTGGGCCGAGGGTTTGGAAAACCAAGATGTGGATCTGGTGATTCCTCTTTCCTTCAGGGAGCTGAACTTGATCAAAGATGAGCAGTACAGTCTTCTGGAGCTGCTCCGTGTTTTCCATCCATCATTACAGGAGGTCACAGCAGAGCAGCTCGCTGGCTCTAAAGTTCTCTTCATCTTTGACGGCCTGGATGAAAGCAGACTTTACCTGGATTTCAACAACAATGAGGCTGTTTCTGATGTCACACAGAAGTCATCAGTCAACGTGCTGTTGACAAACCTCATCCAGGGGAAGCTGCTTCCCTCGGCTCTCGTCTGGATAACTtcccgacctgcagcagccaatcagatccctcctgcgtGTGTTGACAGGGTAACAGAAGTACGAGGCTTCACTGACgaccagaaggaggagtacttcaggaagagagtcagtgatgaagagctgtccagcagaatcatctcccacatcaagacctccaggagcctccacatcatgtgtctgatcccagtcttctgctggatcactgctacagttctggaccaCATGTTGACTACAGACCagagaggagagctgcccaagaccctgactgacatgtactcacacttcctgctggttcagacaaagaggaagaagctCAAGTATGCTGAGGGACATGAGACGAGTCCTCAGGAGCTGACGGAGGCTGACAGGGAAGTTCTTCTGAAGCTGGGGAGGCTGGCGTTTGAACAGCTGGAGAAAGGAAACATCATGTTCTACCAAGAAGACCTGGAGCGCTGTGGTCTGGATGTCACAGAGGCCTCGCTGTACTCAGGAGTTTGTTCAGAGATCTTCAAAAGAGAGAGTGTGATCTTCCAGAAAACAGTCTACTGCTTCGTTCATCTGagcgttcaggagtttctggctgcagtctacctgttccactgttacaccaacaggaacacacaggtaCTGGAGGACTTCCTGGGGAAAGACAACTATGTTTATTCATCTCTGGATGTCTTCCTGAAGAGAGCCATGGAGAAATCCCTTGAAAGTAAAAATGGCCACCTGGACCTGTTTGTCCGCTTCCTTCATGGCCTCTCTCTGAAGTCCAACCAGAGACTCTTAGGAGGCctgctgggtcagacagacaacagtccAGAAATCATCCAGAGAGCCATCAACAACCTGAAGGAGATGAACAGTGATGGGATCTCTCCTGACAGAAGCATCAACATCTTCCACTGTCTGACGGAGATGAACGACCACTCAGTCCATCAGGAGATCCAAGAGTTCCTGAAGTCAGAGAACAGATCAGAGAAGGAACTCTCTGAGATCCACTGCTCAGCTCTGGCCTACATGCTGCAGATGTCAGAGGAGGTTCTGGATGAGTTGGACCTGAGTCAGTACAACACATCACAGGAGGGAAAACtgagactgattccagctgtgaGGAACTGCAGAAAGGCTCGATTGGTGCGCTGTggtttgtcagagatcagctgtgctgctctggcctcagctctgaagtccaacccctcccatctgaaagAGCTGGACCTGACAGAGAACTACAACCTGAatgattcaggagtgaagcagctGTGTGCTGGATTGGAGAGTCCaaactgtagactggagactctgagATTGGAGAGCTGCggtttgtcagagatcagctgtgctgctctggcctcagctctgaagtccaacccctcccatctgaaagAGCTGGACCTGGGCAACAACAACCTggaggattcaggagtgaagcagctGTGTGCTGGATTGGAGAGTCCaaactgtagactggagactctgagattgTGGAGCTGCggtttgtcagagatcagctgtgctgctctggtctcagctctgaagtccaacccctcccatctgaaagagctggacctgaggGGCAACAACCTGAAGGAGTCAGACGTGAAGCAGCTGTGTGATCTGAAGGAGAGTCCAgactgtagactggagactctggAGATGGATGGCAGAGTATACAGGGCTGCACCTGACAGACATAAAGGACATCCGTCCACATCGAAGACAAACCTTGATGTGTCTGAGGACAGAAGAGAGGATCAGCTGAGTCCTGATGATCCAGAGAAgttgaagcagcagcagtttgTGGGAGGAGAGGCTCCCAATACAAATGACACTATGAGTTTCACACCTGAGCTGCTGACTGAGTCTGGAAAGACTTCATACAGGTTCAGGTGTCCTGGTCCAGGTGGGTTCCAGTGTGCTTTGACTGGACTGGTGTTTGTTACGACTCAGAAGGCGGAGCTGCTGTACAACACTGTCCAATGGGATGAGAGCCTCCTCCAATCAGCTGGCAGGATGGCTGCAGGGCCGCTGTACGACATCAAGTGTTCAGAGAAGGCTGCTGTCTGTCAGCTCCACTTTCCACACTGTGAAATCATAGATGCTCCGCTGCCTGATGGCCTGTTGTCTGTCGTCCACATCACTGATGATGGGATGAGCATCCTCGAGCCGCTGGAGATTACTGACACTCACGTGGTTGTAAATGTCCCTCACCTCTCTGTCCTTGGCCTGATCTGGGATGTAGTTAAAAGGTTGTGGACGATACCTGTCAGCGGCCAAATTATGCTGTTTCTCGGACCACTAAACCCAGCAACACAGAGGCAAAACCTCAATGTGCTTCTCCTGCCGAGAAACATCCCTCTGAGCACGGTGAGCGAACAATATCAACAATCTAGGAACATCCGGGTTCCTTCCAAATGTAAACTCATCAAAGATCAAAGCTACACCGTCCAATGTCCTCAGGCTGTGAAAATACAGCCAAAGAAAGCAGATTTTGACCTGGAGTTTGGACCAAACTACGACTCAACGTTTGAGATCCGCCTGCCTATAAACACACCAGAAGTGACTTTAAGAGTCCAAGATGAAGGACAGAGCGTCTGGGAGCATGACGTAGAACTGATTGTTCCAACTGGGCCAAATCCACGGAGGAATGAGCCAGCAGAGGACAGTGATCCCCCAGAAGACATGCTGAGGCAAGTTCGGACACAGTTTGTAGAGCGAGTGTCTGATCCAGTTCTGAACCAGCTTCTGGATAAACTCCTTGAGCGTGGTGTTATAACTGATGAGGAAATGCAGTCAGCCAGAACACAAGGCAGAGCAGACAAAGCTCGAGACGTGATGGACACGGTGAGAAGAAAAGGACGAGGAGCCAGCTCAGTTCTGATCTCTGTTCTCCATGAGGTGGATCCAGTCCTTTCCAGAGAGCTGACATTAAACTGAAGAACCAAACtgtggagagagatgatgaATCTCTCCAATAACTGAGTGTTACACATGATTACTGATTTGTAGTTTCAGCCACTAGATGGAGGCAGAACTTCACTGATAGACAAACAAGAAGCAAATAATTGAGAAAGATTTCTGAGTGATGATTGAACACCTGCTGGTTCAAGAGATACTGGTTGGTCATTTACTCATCCTCTACAGCCTCTTATGTCATCAAACAGCCTCTGATGTCATCAAACAGATGCTAAATGCAGCGTGGCTTTTTCTGGCTCAGAACCATATTTTGTCTTTTACATGTTTTCTTGGGGTGACACAAATCTTCAGCGGTATTCAGAGAAAAGGAACAATAGCTGTTTCGCCTGTTTTTGATGCTGAATGTTTCAACCGACCAACTGGGAATCACTTATAATCATATatttcaacccagtctcacggcagttcatgaaatggtcacgtaattGTAATGTATTGAGTCATGACAAATAAACTTACCTAACACGTTTATCTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039790787.1 True 5878 mRNA 0.48 27 28377079 29112293

Neighbor

gene id symbol gene type direction distance location
LOC120552567 NA coding downstream 21432 28303334 ~ 28355647 (-)
LOC120552593 NA coding downstream 1064714 27310012 ~ 27312365 (-)
LOC120552591 NA coding downstream 1152087 27223754 ~ 27224992 (-)
LOC120552579 NA coding downstream 1171926 27195330 ~ 27205153 (-)
LOC120552735 nebl coding downstream 1187535 27136771 ~ 27189544 (-)
LOC120552571 NA coding upstream 12921 29125214 ~ 29147661 (-)
LOC120552587 hus1 coding upstream 39141 29151434 ~ 29161971 (-)
dnph1 NA coding upstream 490809 29603102 ~ 29610341 (-)
LOC120552739 NA coding upstream 517012 29629305 ~ 29672772 (-)
inhbaa inhba,LOC104934797,LOC102293179,LOC101479519 coding upstream 634215 29746508 ~ 29750259 (-)
G223757 NA non-coding downstream 49385 28313890 ~ 28327694 (-)
G223754 NA non-coding downstream 60079 28265465 ~ 28317000 (-)
G223697 NA non-coding downstream 74111 28251425 ~ 28302968 (-)
G223752 NA non-coding downstream 141008 28231070 ~ 28236071 (-)
G223747 NA non-coding downstream 190441 28178570 ~ 28186638 (-)
G223847 NA non-coding upstream 30635 29142928 ~ 29145651 (-)
G223851 NA non-coding upstream 51663 29163956 ~ 29165000 (-)
G223852 NA non-coding upstream 52353 29164646 ~ 29167677 (-)
G223870 LOC107105063 non-coding upstream 225960 29338253 ~ 29339662 (-)
G223873 NA non-coding upstream 236281 29348574 ~ 29354881 (-)
G223746 NA other downstream 181654 28176365 ~ 28195425 (-)
G223681 NA other downstream 461246 27897134 ~ 27915833 (-)
G223646 fars2,LOC102791206 other downstream 581228 27756346 ~ 27795851 (-)
G223665 fars2 other downstream 622745 27750705 ~ 27754334 (-)
G223645 NA other downstream 637107 27738782 ~ 27739972 (-)
LOC120552583 NA other upstream 188397 29300690 ~ 29319934 (-)
LOC120552608 NA other upstream 367516 29479809 ~ 29543351 (-)
G223911 NA other upstream 438102 29550395 ~ 29563368 (-)
LOC120552738 yipf3,LOC106605823 other upstream 499699 29611992 ~ 29620659 (-)
G223897 NA other upstream 599721 29712014 ~ 29746456 (-)

Expression


Co-expression Network