Gene
RNA
| Item | Value |
|---|---|
| gene id | dnph1 |
| gene name | NA |
| gene type | coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053133.1 |
| NCBI id | CM020930.1 |
| chromosome length | 31697812 |
| location | 29603102 ~ 29610341 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| description |
|---|
| 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 |
| id | name | namespace |
|---|---|---|
| GO:0009116 | nucleoside metabolic process | biological_process |
| GO:0009117 | nucleotide metabolic process | biological_process |
| GO:0006753 | nucleoside phosphate metabolic process | biological_process |
| GO:0009159 | deoxyribonucleoside monophosphate catabolic process | biological_process |
| GO:0044424 | obsolete intracellular part | cellular_component |
| GO:0005634 | nucleus | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0050144 | nucleoside deoxyribosyltransferase activity | molecular_function |
| GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | molecular_function |
| GO:0070694 | deoxyribonucleoside 5'-monophosphate N-glycosidase activity | molecular_function |
| id | description |
|---|---|
| K22928 | DNPH1; 2'-deoxynucleoside 5'-phosphate N-hydrolase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_039790810.1 | True | 751 | mRNA | 0.52 | 4 | 29603102 | 29610322 |
| XM_039790811.1 | False | 704 | mRNA | 0.50 | 3 | 29603102 | 29610341 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC120552587 | hus1 | coding | downstream | 441131 | 29151434 ~ 29161971 (-) |
| LOC120552571 | NA | coding | downstream | 455441 | 29125214 ~ 29147661 (-) |
| LOC120552600 | NA | coding | downstream | 490809 | 28377079 ~ 29112293 (-) |
| dnah5l | LOC103377303,LOC103367559 | coding | downstream | 508897 | 28930231 ~ 29094205 (-) |
| LOC120552567 | NA | coding | downstream | 1247455 | 28303334 ~ 28355647 (-) |
| LOC120552739 | NA | coding | upstream | 18964 | 29629305 ~ 29672772 (-) |
| inhbaa | inhba,LOC104934797,LOC102293179,LOC101479519 | coding | upstream | 136167 | 29746508 ~ 29750259 (-) |
| eci2 | eci2 | coding | upstream | 251461 | 29861802 ~ 29895595 (-) |
| LOC120552613 | NA | coding | upstream | 290069 | 29900410 ~ 29924741 (-) |
| xylb | xylb | coding | upstream | 686141 | 30296482 ~ 30333279 (-) |
| G223915 | NA | non-coding | downstream | 19308 | 29583089 ~ 29583794 (-) |
| G223821 | NA | non-coding | downstream | 64485 | 29475244 ~ 29538617 (-) |
| LOC120552609 | NA | non-coding | downstream | 68743 | 29460675 ~ 29534359 (-) |
| G223876 | NA | non-coding | downstream | 245210 | 29356619 ~ 29357892 (-) |
| G223873 | NA | non-coding | downstream | 248221 | 29348574 ~ 29354881 (-) |
| G223898 | NA | non-coding | upstream | 4079 | 29614420 ~ 29694809 (-) |
| G223906 | NA | non-coding | upstream | 5440 | 29615781 ~ 29617970 (-) |
| G223904 | NA | non-coding | upstream | 46880 | 29657221 ~ 29710009 (-) |
| G223905 | NA | non-coding | upstream | 82851 | 29693192 ~ 29723375 (-) |
| G223899 | sugct | non-coding | upstream | 90218 | 29700559 ~ 29792987 (-) |
| G223911 | NA | other | downstream | 39734 | 29550395 ~ 29563368 (-) |
| LOC120552608 | NA | other | downstream | 59751 | 29479809 ~ 29543351 (-) |
| LOC120552583 | NA | other | downstream | 283168 | 29300690 ~ 29319934 (-) |
| LOC120552566 | NA | other | downstream | 756849 | 28781890 ~ 28846253 (-) |
| G223686 | LOC100697526 | other | downstream | 1085176 | 28011028 ~ 28517926 (-) |
| LOC120552738 | yipf3,LOC106605823 | other | upstream | 1651 | 29611992 ~ 29620659 (-) |
| G223897 | NA | other | upstream | 101673 | 29712014 ~ 29746456 (-) |
| LOC120552628 | NA | other | upstream | 240315 | 29850656 ~ 29856972 (-) |
| G224031 | NA | other | upstream | 787535 | 30397876 ~ 30578444 (-) |
| LOC120552615 | NA | other | upstream | 794842 | 30405183 ~ 30420550 (-) |
