prmt6 (prmt6)


Basic Information

Item Value
gene id prmt6
gene name prmt6
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 9460305 ~ 9463043 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039790842.1
TTTCACAATGCGGAAGAAGCGCAACAAAACACTGTGAGGTTGTAGCACAAGAGCCGAGAAGATGTCTCATGtcgtaaagaaaagaaaattggaTAAAACCCGTCAGGACAGACTGTACTTTGACAGCTATACTGATGTGACTATTCACGAGGAAATGATAGCGGACCACGTCCGCACGAACACGTACCGGATGGCGATACTAAGGAACAGTGAGTCCATACGGGGTAAAGTTGTACTGGACGTCGGGGCAGGAACAGGCGTTCTAAGCATGTTCTGTATTCAAGCCGGCGCTAAGAAAGTCTACGCAGTTGAAGCCTGTTCTATCGCAGAGCAGGCTGTGAAAATagttaaacaaaacaacatggagGACAAAATTGAAGTCATTCGAGGCACAGTGGAGACGGTGGACCTACCGGAGATGGTGGAGGTGATAGTGAGCGAGTGGATGGGTTATGCCCTCCTGCACGAGTCCATGCTCAACTCGGTCCTCTACGCGCGCGACAAGTGGCTAAAGCCGGGCGGCATGATCCTGCCCAGCAAAGCCGAGCTCTACATCGCACCAATTAGCGACCCGGTGGTAGAGGACCGCTTACATTTCTGGTACACCGTCAAAGACCAGTACGGCGTCGACATGTCCTGCATGTCCGACTTCGCCAGGAGGTGTATCATGAATTCCGACATAACCGTGAACTCGGTGACCGTCGAGGACGTGCTGTCCCACCCGGCCCGCTTCGCCGAGCTCGACTTGTACTCGGTCACCGTGGAGGAGCTACGGTTGGTGAAGGGCAAGTTCAGGTGCGAGTCATTCGGCTCGGCGGCAGTGAACGCTTTCTGTGTTTACTTCACGGTTACTTTCCCCTGCCCGGACAAGCCGCAGGCGCTCGTGCTCTCCACTTCCCCGTTCAAACCTGAGACGCATTGGAAGCAGGCTGTGCTGTACCTGGATGCTCCGGTGGATGTGGTGCAAGACACGGTGGTTACCGGAGAGATCAGCATGTTTCCCTCGGAGGAGAGTGCCAGACATATATGTGTCCATGTAGACTACACAATAGGAGAGCAGAAAAGACAGTCCAAAACTTTTTCCATCCCTGACTGGAGCAGTGAAGCTCAGTCATAGTTTAGCGTCAACATTTAGTGTTACAGTTCAATCACCAGGCAACACTCTCAAAGACCTAGGTCCTTGTATTATTATCTGTCACTAAGACTCCCAACCTGCTTAATGGGAGTATTGGAGGAAGTGGAGCAATGACTGTATTTTTGACCAGTGTGGTAAATAATCcatatataaaaactataatGTCACATAAGGTCTCTAATGGGGAGACATTGGGCAAATGTATGAAGGGACTGCAGCTGCCATCTAGcctatacatacacatgctcaTACATACTTAGGTTTTGACCCAGCTCTTTTTTAAGTCTTAAAAAATTCAGTTTGagtagacacaaacacatagtgGCTACTACAGTCATTATGTGCACTACATTATATGGTCTTAGTTTGGAGTTGTTTACGTTGTGTagtgtttatgtttgttttcacACCTAATAAATTGGAAGAGGACCCATGCATATATCTATCTAATAACTGATATGTTTTTTAttgcatactgtatattcagtTTATAGCAATTATGATCTATTTTATACCAAAACATTGCAGTAGTAATGAGTAGGATTGTAACTAACCATTAGCTTACTGATgtcagaacatttaaaaaacgtttgACCAGCaacccaaaacccaaagattgtttgtttgtttatttactaATACTCAATTACTTACTTATTACTATACTAttacagacagagaaaaacagcATATCCTAACAGTTGAGAAGCTGGAATAGGGGATGTTTGGTATTTTTAAATCAGAACTCCCATAAACAATTAGTCAgtagtcaaaatagttgctgattactCTTCTATTGAGCAACTAATCAATCGACTAATCATTTTAGCTCTACTATTTCTTGTAACAGTTTAATTATTATTGGTGGGGGAAAGCCTTAGAAACAGTTTTGATCATCAAAAGAAACAAAGTTGCTTGACTAATAAATAGTTTTAGGAGGGTGTGTAGCTCTTGGCTTTTACAAATTGTTAAATAAATCCAATGCCATGCTGCAGACATCTggtattttaataaatgtaatcaTGCATATTGTGTTGGATCTGAGAAAGATGATGCATTTAAATGAGGACTGATATATTGACTTGGACTAGCTGCAGTCAGGCAGGAGGTGTTTTATATGGGCTTGGTTTCagtttttaataacaaattaaaTTGCCTCATTCTTTTGGTTTAAAACAAGCACGCACTGGTAATGGTTGCCAGACACCCCTGACTTTGTCCAAAGTTGTAATTCTACTGCAGCATTTTGAAAAATAGCAATGACTATATTAATTGTACCACGATGTATTTCGTTCCTGACCATTAAGGATCTTGCTGTCTCCAAGTGACTAAGTTGTGGAAATATGCAACGTTTTTATCGCAATCAACAAtcaagaatacatttttttaaatgaaagttaaTAGTTTGATGGATACATTTAATAATTTCTCACTCATGTATTAACAGAAGAAGTTATCTGGTCACTGATCAGTCATTGATTCACTTTTATACTACTTCAGAGTCAGCGTACAATAAGTGGGTTTGACGGATGATATTGCAGGGAAACTGTGTTTCAAAGAGAATTGAGCAAATGCAAACTAGACTAATAAACTGTTTGACTGTT

Function

symbol description
prmt6 Predicted to enable histone binding activity and protein-arginine N-methyltransferase activity. Acts upstream of or within several processes, including glial cell development; histone H3-R2 methylation; and negative regulation of macromolecule metabolic process. Located in chromatin. Orthologous to human PRMT6 (protein arginine methyltransferase 6).

NR:

description
protein arginine N-methyltransferase 6

GO: NA

KEGG:

id description
K11437 PRMT6; type I protein arginine methyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039790842.1 True 2739 mRNA 0.42 1 9460305 9463043

Neighbor

gene id symbol gene type direction distance location
abca4a LOC100710805,LOC102195251 coding upstream 503765 8913264 ~ 8956540 (+)
arhgap29a LOC103374575,LOC104943220 coding upstream 547407 8873610 ~ 8912898 (+)
garem garem1 coding upstream 671604 8780406 ~ 8788701 (+)
dph2 dph2 coding upstream 692103 8763746 ~ 8768202 (+)
mcur1 LOC100707050 coding upstream 696929 8756644 ~ 8763376 (+)
ntng1a ntng1,LOC102781425 coding downstream 13740 9476783 ~ 9591177 (+)
LOC120552675 LOC103356150,LOC104955777,LOC102780560 coding downstream 274236 9737279 ~ 9745454 (+)
sh3glb1a sh3glb1,LOC104955778,LOC107097676,LOC105935324,LOC107382675 coding downstream 284859 9747902 ~ 9762135 (+)
fam168b fam168b,LOC103356147 coding downstream 327269 9790312 ~ 9796422 (+)
rbbp8 NA coding downstream 334138 9797181 ~ 9805437 (+)
G218693 NA non-coding upstream 123766 9336332 ~ 9336539 (+)
LOC120551942 NA non-coding upstream 167652 9260442 ~ 9292653 (+)
G218687 NA non-coding upstream 209546 9250470 ~ 9250759 (+)
LOC120552481 NA non-coding upstream 249220 9208182 ~ 9211085 (+)
G218666 col11a1 non-coding upstream 287372 9166381 ~ 9172933 (+)
G218690 NA non-coding downstream 151797 9614840 ~ 9665678 (+)
G218709 NA non-coding downstream 283986 9747029 ~ 9747273 (+)
G218710 NA non-coding downstream 284302 9747345 ~ 9747706 (+)
G218724 NA non-coding downstream 349176 9812219 ~ 9813878 (+)
G218727 NA non-coding downstream 379276 9842319 ~ 9842709 (+)
G218695 NA other upstream 1605 9458183 ~ 9458700 (+)
G218694 LOC106675555,LOC106675866,LOC106674541,LOC106099046 other upstream 82158 9376944 ~ 9378147 (+)
rnpc3 NA other upstream 230142 9211918 ~ 9230163 (+)
G218441 LOC101478037,LOC102216221,LOC100695799 other upstream 853727 8550783 ~ 8606578 (+)
LOC120552265 LOC101478037,LOC102216221,LOC100695799 other upstream 863949 8523299 ~ 8596356 (+)
G218848 LOC103365363 other downstream 959543 10422586 ~ 10423249 (+)
G218875 pabpn1 other downstream 1025224 10488267 ~ 10494988 (+)
dcaf11 dcaf11 other downstream 1053407 10516450 ~ 10526204 (+)
ipo4 ipo4,LOC102785023 other downstream 1240095 10703138 ~ 10719314 (+)
zgc:101569 LOC102309791,LOC106455900,LOC102784166,LOC100695384,LOC101475816,LOC106931939 other downstream 1306332 10769375 ~ 10815975 (+)

Expression


Co-expression Network