si:ch73-264p11.1


Basic Information

Item Value
gene id si:ch73-264p11.1
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 25466333 ~ 25488648 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039790885.1
ATGGAGGTGAAGACGGAGAGAAGGAGCTCTGAATGCAGAGTGAAGGAGGGACTGACTGAACGAGGGAGGGATTGTTGTGAGAgACTCTCCAGACCTCAGGCAACTAAAGCAGCATCTTCATCTGGACTTTCTGTTGGCCGCTGTTTCCCATCTCCGCGGGGAGTGCACACAGCTACTGTTCTCAGAAATGAAGCTGTCCTGAGACGAGTTTGCTCAGCGGGTTTTTTGGTGGATGTCGCCATGGCAGCAGCTCTGCCTGTGTTTTACCACGGCGCCATCTCCAAGACAGAGTGCGAGGAGCTGCTGGGGAAGAAGAACAAGGACGGAGCCTACCTGATCCGAGACAGCGAGACCATCCAGGGagctatgtgtctgtgtgtttaTAAACAGAAGGTGGTGTATACCTACAGACTGCTGCAGACACACACTGGAAACTATACTCTcatgACAGCGGGAGGTTTGGATGagacattttttaagaatttgGACGACCTGGTCCGTCACTATAAAAGGAAGAACCAGGGCCTGGCCATGCACCTTCGCCACTCTGTCAAAAGAAAGACGGCCTTGTTGATCCAGCCCCAAAAACGTCCTGATCCACCCGATCCAAGTGAGGCACAGGAGAAGCAGGCGCCTGTACCCGAAGAAGATCATGACTATGAGAATGCTCCTGACTCAGAATACGTCGAAGTGTTGCCTGATTGAACAACTTTAACGCGTTAGGAGAGTGGAAAAGACATTTTCTCTGAACTATGGGCACTTAAAAAGGTTCACAGACTGGATCGAATTCAGAGTAATGAATATGGAACTTGGACAAACATATGCAGAAGAAGAGGGCTCTTCATCTGCTTGTATTCCTGTAATTACGAGTGGAGAGGTCGGTCGCTCAGAccgaaatatctcaacaactgttggatggattacCGTGAGATCTGGTTAAGACGTTCGTGATCCCCAGAGGATGTACTGTAATAACTTTGTCTTCATCTTTTAACATTATCTGCTGCGATTTGCTAACCGGCACATGCATGCCCAGACTGTATGTGAATGGCCTGTGATATAagatcattttcatttaaaaacactgctttaaaatgaaaatgtattagTTTGGATGTGGCCTTTAAGCCACATCGCGAAGATGGGTTTTGTTTCGTTTGGCGTCACTTCCGGCCATAATTGCAGGTGTGTTTCTAGATCTCCATTGTTGCTTGTGTTGATTGTGGTGAAGCACCGCTAAACCTCAGCGCAGCCTCACAGGGCTGCAGACTCTTGTTCTAGCGATAAATAATATCTTgtatttctgctgctgctgctttgcgGGGCTGTACACGTATCTGGGAGCTATTTTTGTTCAGCTGAAGAGCATTAACGGGCTAATTTTTTACACACCATCGTGTGAAACATCGGATTCCGATTAGATGCATGTCATCATTTGCATATGACCAGAGAcggggaagtaacgaagtacaaatactttgttactctactcaagtagatttttcagatatttttactttttactttactatttatttttgtgccgaCTTGTTatttttactccttacatttattACACGGATATTGGtgctttctactccttacatttaacaaaattgtctcgttactttagttaccgttattatttttcgcgTCATCAATACCAAATTCagtctaattggatgggaatatacgttgcacttgacgcaccgctacaagacgactcgacagattcggcggcATTCATTCGCGGCAAATCATCGCGGCTTGttggcggtaacgttagcacctagtggtatggacggcgacataattgaaaatgaagaaaaacggAGATGCCAGAGAttcggcagacaagcagcaagacattcccaatcatcctttagcattatctgagagagatgtttcaGATAGTAGGCATCAAGAATGACGAGATGTTAgttgtaactctaaaagtatgggcaACTTCTTAATTagtctgtttagtaattcatattttatcctttattttcttcccagaagccatat

Function

NR:

description
SH2 domain-containing protein 1B-like

GO: NA

KEGG:

id description
K07989 SH2D1B, EAT2; SH2 domain-containing protein 1B

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039790885.1 True 2028 mRNA 0.44 5 25466333 25488648

Neighbor

gene id symbol gene type direction distance location
cip2a kiaa1524 coding downstream 5312 25439154 ~ 25461021 (-)
chrnd chrnd coding downstream 29191 25429238 ~ 25437142 (-)
LOC120552403 NA coding downstream 39136 25414884 ~ 25427197 (-)
LOC120551896 LOC101467476,LOC100708037,LOC105920600,LOC101173583 coding downstream 236789 25199062 ~ 25229544 (-)
LOC120552454 NA coding downstream 268800 25182212 ~ 25197533 (-)
zgc:112982 NA coding upstream 16491 25505139 ~ 25527126 (-)
map7d2b NA coding upstream 39584 25528232 ~ 25546104 (-)
eif1axb eif1ax,LOC101173816,LOC102222479,LOC107081821 coding upstream 75238 25563886 ~ 25573965 (-)
rps6ka3b rps6ka3,LOC107081812 coding upstream 102832 25591480 ~ 25660731 (-)
pdha1b pdha1,LOC104960622 coding upstream 180585 25669233 ~ 25683270 (-)
LOC120552443 NA non-coding downstream 73295 25347574 ~ 25393038 (-)
LOC120552442 NA non-coding downstream 78184 25382543 ~ 25388149 (-)
G223206 NA non-coding downstream 80712 25316612 ~ 25385621 (-)
LOC120552439 NA non-coding downstream 90832 25358648 ~ 25375501 (-)
LOC120552441 NA non-coding downstream 120381 25339252 ~ 25345952 (-)
G223265 NA non-coding upstream 89651 25578299 ~ 25582204 (-)
G223269 NA non-coding upstream 115622 25604270 ~ 25604783 (-)
G223270 NA non-coding upstream 147806 25636454 ~ 25637238 (-)
G223239 sat1,LOC102777910 non-coding upstream 169941 25658589 ~ 25721181 (-)
G223277 NA non-coding upstream 212149 25700797 ~ 25770143 (-)
LOC120552232 LOC103371349 other downstream 379431 25035884 ~ 25086902 (-)
msl2b msl2,LOC102304425,LOC102778660 other downstream 498227 24963417 ~ 24968106 (-)
avl9 avl9 other downstream 611445 24796589 ~ 24854888 (-)
LOC120552322 cdh12,LOC108234660,LOC100695194,LOC101477368 other downstream 1946807 23401543 ~ 23519526 (-)
smpx smpx other downstream 3247952 22202767 ~ 22218381 (-)
LOC120552299 NA other upstream 67825 25556473 ~ 25562540 (-)
LOC120552722 NA other upstream 233842 25722490 ~ 25738940 (-)
mynn mynn other upstream 328781 25817429 ~ 25834224 (-)
G223328 NA other upstream 492812 25981460 ~ 26042864 (-)
G223331 LOC101483661,LOC101069443,LOC103355338,LOC108249550 other upstream 494946 25983594 ~ 25997932 (-)

Expression


Co-expression Network