LOC120552713 (dnajc13)


Basic Information

Item Value
gene id LOC120552713
gene name dnajc13
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 20020133 ~ 20055209 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039790937.1
AGACCAAGATGTTTCCCCTTTACCTTCAATCGCGGTCCTGTGAAAAGATGAATGTcgtcaaagaaaacaaagaccTGGCCTGTTTCTACACCACCAAACACTCCTGGAGGGGAAAGTACAAGCGAGTCTTCTCAGTGGGGACTTATGGCATTACCACTTACAACCCTGCCACGCTAGAAGTAACAAATCAGTGGCCTTATGGGGACATCTGTGGTATCGGTCCGGTAGGAAAAGGTCAGGGAACAGAGTTCAACCTTACATTCCGCAAAGGCAGCGGCAAGAAGTCAGAAACGCTCAAGTTCTCAACAGAGCACCGGACAGAGCTGCTCACAGAAGCACTGAGATTCAGAACAGAATTTTCAGAGGGAAAAATAACTGGCAGGCGTTACAACTGCTACAAGCACCACTGGAGTGACGCACGGAAGCCAGTGAGTTTAGAGGTGACACCGGGCGGCATCGACCAGATCGACCCGCAAACCAACCGGGTGGTGTGTTCCTACGACTATCGTAATGTGGAGGGCTTCGTCGAGGTCTCTGATTACCAGGGAGGATTCTGCATCCTTTATGGGGGCTTCAGCAGGCTGCATCTGTTTGCCTCGGAGCACCGGGATGACATCATCCGCTGTGCAATTGAGCATGCTGGGAACTTCATCGGTATCATGCTACGACTGAGGAAGGAGACGTTGACCTTCGAGGATTTTGTGACAGACAGGTTGGGGAAGTACAGCTCAGACGACAGCATCACTTCACTGGCTGAGTTTGTGGTCCAGAAGATCACCCCACGACACCCGGAGCCTGTTAAGCGTATACTAGCCCTGACAGAGACTTGTCTAGTCGAGAGAGACCCAGCTTCGTACAACATAGTCACCATCAAACCCTTCGGCGAGGTATTTGCTCTCATCTGTGACGTAGACAACCCTCAGGTGTTTACAGTCGAATTCATCAGAGGTCAGATCCGAAAGTTTTCCTCCACAGAAAGGGACTCCCTGTTAGCCAGCCTACTTGATGGAGTCCGCGCATCAGGCAACAGGGACGTGTGCGTCAAGATGGCCCCCACGCAGCGAGGACAAAGATGGGGCCTACTGAGCATGCCCGTGGATGAGGAGGTGGAGAGTTTGCATCTCAAATTCCTGGCAGCACCTCCTAATGGAAACTTTGCAGATGCAGTGTTCAGATTCAATGCCAACATATCCTACAGTGGAGTGCTGCATGCAGTAACCCAAGATggTCTTTTCTCTGAGAACAAAGAGAAGCTCATCAACAACGCCATCCTGGCTCTTTTATCCCAGGAGGCCGAGCTGCCGGCTCTTAACACTGAGCTGGAGAGCCATTTCCAGGCCATTCGACGCTTGGTGGCCTCCAAGGCTGGCTTCCAGGCTTTCACCCAGCTGCCTAAGTTCAGGGAGAAGTTGGGAGTAAAAACGGTAAAAGCTTTAAAAAGGAACAACAACAGCGTGACACATGCTGCTGTAGACATGCTCTGTGCCCTTATGTGTCCAATGCACGATGACTATGACCTTAGGCAGGAGCAGCTGAACAAGGCCTCTCTGCTTTCCTCCAAGAAGTTCCTGGAGAACCTCCTTGAAAAATTCATCACTAACGTGgACCATGGAACAGGAGCTTTGGTGATCAGCTCCTTACTGGACTTCTTAACGTTTGCCCTGTGCGCCCCCTACAGTGAAACCACAGAAGGGCAGCAGTTTGACATGCTGCTTGAGATGGTTGCCTCCGATGGTCGCACCTTGTTCAAACTCTTCCAGCATCCCTCTATGGCAATAGTGAAGGGAGCAGGCCTGGTGATGAAGGCCATTATTGAGGAAGGAGACAAGGAAATAGCCACCAAGATGCAGGACCTGGCCTTGAGTGAAGGGGCTCTTCCGAGGCATCTGCACACTTCTTTGTTCACCATCAGCGCTGACCAGCGGATGCTTACCAACAGGCAGCTAAGTCGTCACCTGGTGGGACTTTGGACGGCAGAAAACCCTGTTGCCATGAACCTTCTGAAAAGGATACTGCCAACAGGCCTGCTGGCTTACCTGGACAGTCCTGACCCAGTCCCGGAGAAAGATATGGACAGAATGCACGTCCGTGACAACTTGAAAATCGCCACGGACCAGCTAAATCGAAACAAGGTGCCGGAATGGCAGCGTATAGCCGGCAAAGCAGCCAAAGAGGTGGAGAAGTTTGCCAAGGAGAAGGCTGATGTAGTGTTGATGCCAcactggagaaaaaaaaaaaaaaaaaaaaaaaggaaagataggggtaaaaaaaaaaggCAGGACAGAAATAACCTGAACCCAAACCAAAAGCCTGTCATCCTGAGAAAGAGACGCCAGAGAATAAAGATTGAAGTCAACTGGGAGCTTTTCTACTACAGattccaGCTCGACCATGCACGGTCCAACCTCATCTGGAACCTGAGGACGAGAGAGGAGCTGCGGGACGCTCTGGAAGGGGAGATGCGCGCCTTTAGCGTGGACCGCGAGCTCGGCAGTGCCACCGTCATCTCCTGGAACCACCAGGAGTTTGAGGTGAAATATGAGTGCCTTTCAGATGAGATTAAGATTGGGGATTATTACCTGCGTCTGCTGCTTGAGGAGGATGAAAGTGACGAATCGAATGCCATCAAGAGATCATATGAGTTCTTCAATGAACTCTACCATCGCTTTCTGCTTACACCAAAAGTTACGATGAAGTGCCTGTGCCTGCAGGCACTTGCTATAGTCTATGGGAAATGCTACGATGAAATTGGCCCCTTCACAGACACTAAATACATTGTGGGCATGCTGGACCGATGTACAGACAAACTGGAAAGAGACAGACTCATCCTCTTCCTCAACAAACTCATTCTCAACAAGaaAAATGTGAAGGAGGTAATGGACTCAAATGGAGTGCGTATATTGGTGGATCTGCTCACCATGGCCCACCTGCATACCAGCAGAGCTACTGTGCCCCTACAGAGCAACGTGCTGGAGGCATCGCCAGACATGAAGAGGGAGAGTGAGAAAGAGTGGTACTTTGGTAACGCAGACAAGGAAAGAAGAGGGCCTTTCAGTTTTGAGGAGATGCAGGACTTTTGGAGCACGGGTGTCCTGACAGCGAAGACAAGATGCTGGGCTCAGGGGATGGATGGCTGGCGCCCTCTGCAGGCCATCCCCCAGCTAAAATGGTGCCTCCTGGCCACTGGACAGGCAGTAATGAACGAATCCGACCTGGCTACACTAATCCTTAACATGCTGATCACCATGTGCTCCTACTACCCCAGCAGAAAACCAACTTATGTTTCTATTCATCTATATTTAACTGGGatcttcttcttcatcatgATGTACACAGGCTCTAACGTGCTTCCTGTAGCAAGGTTCCTGAAGTACACACATCTGAAACAAGCCTTCAAATCAGAGGAGTCTAAGGGTCAGGACATAGTGCAGCGTAGTGTTCTGGGGCCGGTACTGCCTGAGGCCATGGTGTGTTATCTGGAGAACTATGAGGCTGAGCGCTTCTCAGAGATATTCCTTGGAGAATTTGACACACCTGAGGCCATTTGGAGCAGTGAGATGAGGCGCATGATGATCGAGAAGATAGCTGCCCACATAGCTGACTTCAGCCCCAGGCTGCAGAGCAACACGCGGGCCCTTTACCAGTACTGCCCCATCCCCGTGGTCAGCTTCCCTCAGCTGGACAACGAGCTCTTCTGCAACATCTACTACCTCAGACATCTGTGTGACACCATCCGCTTCCCCAACTGGCCCATTCGAGATGCTGTAAAGCTGCTAAAAGACACCCTTGAAGCTTGGAAGAGGGAGGTGGAGAAAAAGCCTCCCTCTATGTCTGTCGATGATGCATACGAAGTCCTCAACCTCCCGAAAGGACAGGGGCAGCATGAGGagagtaaaatcagaaaagcttACTTCAGACTGGCGCAGAAGTACCATCCAGACAAGAACCCTGAGGGCAGGGACATGTTTGAGAAAGTCAACAAAGCCTACGAGTTCCTTTGCACAAAGTCTGCCCGTATCTTGGATGGCCCCGACCCAGAAAACATCATCCTTATCCTCAAGGCTCAGAGCATCCTGTTCAACCGACACAAACAAGAACTGGAACCTTACAAATACGCCGGTTATCCCATGCTCATCAAAACAATCACAATGGAAACCGAAGATGAGCTGCTCTTCTCCAAaacctcccctctcctcccggCTGCTGCAGAACTGGCCTTTCACACCGTCAACTGCTCGGCTCTTAATGCAGAGGAGCTGCGCCGCGACAACGGCATTGAGGTGTTGCTAGATGCTCTCTCTCGGTGTGTTGCTGTGTTAACCGCATCCAGCAAGCCTGGTGACATGGCTGTACAGGTGTGCGGGCACATCTGTAAGTGCTACAGTGTTGCAGCCCAGTTTGAGGAATGCAGGGAAAAGATCATCGAACTGCCCACCATCATCAGGGACCTCTGTCACATCTTGTTCTATGGAAAGGGCCTCCCGAAAACTGCCGCCCTGGCAGTGCAGTGTGTGAGCTCCTTCGCGGTGGATTTCTTCCTACAGACTCATCTGTACCACGCTGGTGTGCTCTGGCACCTGCTGGTCCACCTCTTCAACTACGACTACACTCTGGAGGAGAGCGGCGTGCAGGCGAACCAGGACACAAACCAACAGGAGGTTGCAAACAGCCTGGCCAAGCTCAGCCTGCTAGCTCTCAGCCGTCTGGGAGGCTACACCCAGACACCACACACCCCGGACGGTAACAATCCTGTTCCAGAGACCAACGGCATTGAGGGCACACCTCCAGAGAACCCCACCATCCGCAAGAGCTTAGCAGCCATGCTGACACCATACATCTCGAGGAAGCTGGGAACAGGATCTCCATCTGAGGTCTTGAAGCTGCTGAATAGCAACTCGGAGAACCCATACTTGATCTGGAACAATGGAACCCGAGCCGAGCTGCTGGAGTTCCTGGAGGGTCAGCAGGAGGGAAACATCAAGAGGGGAGAAAATGACAAAAGCTTTGGTGCGGAGTTTGTGTTCAGTGATCACAGCAAAGAGCTGATAGTTGGGGAGATCTTTGTCCGCGTCTACAATGAGCAACCAGCTTTTCCTCTTGAGTACCCAAAAGCATTTGCAGCCAGTCTTCTGGACTACGTAGGCTCCCAGGCCCAGTACCTCCACACTCTGCTGGCCATGAGTCAGAGTAACAAAGTAGAGTCCCAGCAACATGCTGAGAGGCTCCGCTTCGCTGAGATGGCTTTAGAGGCTCTCCGCAATGTCATCAAGAACAACCCCGGTTCGGAGTCGGAGTGCATCGGCCATTTCAAACTGCTCTTCTCTTTGTTGCGGGTTCATGGAGCTGGCAGAGTACAGCAGCTGGTTTTGGAGGTTGTAAATACGGTGACGTCAAACCAAGAATGCGTTAGCAACATTGCCGAGTCGTTGGTGTTGTCCAACCTTCTGTTGCTGCTGCACTCACTCCCCTCCAGTAGGCAAATGGTGCTGGAAACCTTGTATGCGCTGGCTTCTAACACAAAGATAGTCAAAGAGGCTATGGCCAAAGGTGCTCTGATCTACTTGCTAGACCTCTTCTGTAACTGCACGCATCCCCAAGTTCGCACACAGACTGCAGAGCTCTTCTCCAAGATGACCTCAGACAAGCTGGTCGGGCCAAAGGTGCGTCTAACGCTGATCCGTTTCCTTCCTGGTGTGTTCATGGACGCCATGCGAGACAACGCTGAGGCAGCAGTGCACATATTCGAGGGAACACACGAGAACCCTGAGCTCATCTGGAATGACAGCTCAAGGGAGAAAGTGTCCACCACTGTCCGGGAGATGATGCTTGAGCACTTTAAACAGCAGAAGGATAATCCTGATGTGAACTGGAAATTGCCAGAGGACTTCACAATGGCTTATGGAGCAGGACAGGGCGAGCTAGAAGTTGGTGGAGTCTTCTTGCGTATCTTTATTGCTCAGCCAGGCTGGGTGCTTCGCAAGCCTCGAGAGTTCCTGGTGTCGCTCCTGGAGACCCTGACTGAGCTGCACGAGAAAAACAACCCCAATGGTGAGGCCCTAGAGACGGTTACTACGGCAGCAGTATGTCTGTTCAGCACACAGAGCCAGCTGGCTGACCAGGTTCCTCCTCTGGGTCACCTGCCTCGAGTCCTAGCAGCACTCAACCACAAGAACAACGCTGTGCCCAAGAGCTCCATCCGCCTCATCCACGTGCTATCGGACAATGAGctgtgtgtacGCTCCATGGCTTCTCTGGAGACTATCGGCCCCCTAATGACTGGGATGAAAGCTCGGGCAGACATGGCCGGATTAGCTTGTGAAGCTCTAAACCGCATGTTCCAGAAGGAGCAGTCAGAACTAGTAGCCCAGGCTCTCAGAATGGAGCTGGTCCCATACCTTCTGAAGCTATTGGAAGGAATCGGCCTAGAGACATTAGATAACCCTTCAGCTACCAAGGCCCAGATAGTGAAGGCTCTCAAGTCCATGACTCGCAGTCTGCAGTACGGAGAACAGGTGAATGAGATTCTAGCGAAGTCCTCAGTGTGGAGTGCCTTCAAAGACCAGAAACATGATCTTTTCATCTCAGAGTCTCAGACCGCAGGCTACCTGACTGGTCCAGGAGTAGCAGGTTACCTTACAGCAGGAACTGGCACCCCGGTAATGCCCAACGTCCCACCCCCTGTGGACAATGACATTGGAGACCAAGGCTGATGGACACTCTCACAGTCACGCTCTGGCACCCAGACTGCCCTGCAGCTTCACGGCCGCAGCTCAGAGAGGGACTGTTCGGCTCCCAGACgaggggatggagagggagaaaagacgGAGGAGAGCGGGCCATCTTTGACCGTCACCAAAATCTCTGCAACACCTTCTCCATTatcactctcctctccccttacaAATGGCACTCAAGTCTTCATAAACACTTTGAAATTGTTTTAACGGATGACCACATTTGTCTTGTTTCTGTGCTTCTTTTCTTGTTTCTTCCAGTGACACACAGAAGAGGTTACATTTTGTatgaatatattttttactctagattttgttttttcatgaCATTGGAAGACTGAGGTGTGTTATACTGAAGGTTAACTGTCTCTTCTCTATTACCTTATTTCCTCTTTCTCatattctgattggctacacTTACCCTAAATCCTGAACAGAGGATTCTTGGCCTTGTTTGTGACACATTTGTGCACAGGACCTATCTTACATAATATAATGGATTCTCATACGACAAAGGAGAAAATGTTAAATTAGGGAATTAGAGGATATATTTATGATTTCTCTTTCCTATTTCTCTACAAGAAAATGTCACTTGAACCCTGGGAGTGATGCTGACCTCTTGTCTGGTTTGGTCAAGTCCTGTTCAATCCAGTCTTTCAAAGTTAACACAGATCCGCTCTCCAAATGTTCAGCCTCTtattcctctgatcttaattCATAGTTCATTCTGCTCTCTCTTTGAAGGCTTTTAAAGTAATTACCCCCCCCCAAATGCAAAAAGCACTAGATTATTTATAAGTGAATAATAACCACCGGAAATGAGCTTCTGCTAAGACATGACGAATGATGTTGACTCTGATTATGAATCTATGTGAAAGACTAGTGCAATTTGTGAAATGTTCAATGTAATATTACGTATATAAACTTTCTATATTgaatgtacattttaaaaaaaatcagtcgCACTTGTACATAAAATTTTAAGAATAAAAGGGAATCCACAATGTT

Function

symbol description
dnajc13 Involved in endosome organization; regulation of early endosome to late endosome transport; and regulation of early endosome to recycling endosome transport. Located in cytosol and early endosome membrane. Colocalizes with WASH complex. Implicated in Parkinson's disease and Parkinson's disease 21.

NR:

description
PREDICTED: dnaJ homolog subfamily C member 13 isoform X4

GO: NA

KEGG:

id description
K09533 DNAJC13; DnaJ homolog subfamily C member 13

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039790937.1 True 7742 mRNA 0.50 56 20020133 20055209

Neighbor

gene id symbol gene type direction distance location
topbp1 topbp1 coding downstream 1144 20002456 ~ 20018989 (-)
tmem108 LOC107589950 coding downstream 20883 19958284 ~ 19999250 (-)
cdv3 cdv3 coding downstream 65172 19949981 ~ 19954961 (-)
kif9 NA coding downstream 112057 19889682 ~ 19908076 (-)
si:ch73-173p19.1 LOC103363515,LOC104954586 coding downstream 353413 19658889 ~ 19666720 (-)
prpf4bb prpf4b coding upstream 124347 20179556 ~ 20190506 (-)
LOC120552510 cdh7 coding upstream 516999 20572208 ~ 20732251 (-)
LOC120551976 LOC100696589,LOC106947338,LOC106912688,LOC104946573,LOC103147557,LOC103456804 coding upstream 679817 20735026 ~ 20741393 (-)
LOC120552480 LOC103356684 coding upstream 692538 20747747 ~ 20758794 (-)
zgc:111976 NA coding upstream 809634 20864843 ~ 20872952 (-)
G221183 puf60 non-coding downstream 202018 19814070 ~ 19818115 (-)
G221182 NA non-coding downstream 208998 19808752 ~ 19811135 (-)
LOC120551913 NA non-coding downstream 265625 19724099 ~ 19754508 (-)
G221150 NA non-coding downstream 268839 19750105 ~ 19751294 (-)
G221160 NA non-coding downstream 300511 19718448 ~ 19719622 (-)
G221287 tmx3,LOC102777948 non-coding upstream 113472 20168681 ~ 20262155 (-)
G221293 pxdc1,LOC104939983 non-coding upstream 152529 20207738 ~ 20213258 (-)
G221359 NA non-coding upstream 413937 20469146 ~ 20469453 (-)
G221385 NA non-coding upstream 512350 20567559 ~ 20567784 (-)
G221400 NA non-coding upstream 630981 20686190 ~ 20758774 (-)
G221048 ankh other downstream 693239 19315591 ~ 19326894 (-)
mettl4 mettl4 other downstream 1070638 18938913 ~ 18949495 (-)
LOC120552352 colec12,LOC102798044 other downstream 1209189 18772977 ~ 18810944 (-)
G220833 NA other downstream 1322163 18610236 ~ 18697970 (-)
si:ch73-174h16.4 LOC103364270,LOC104947970 other downstream 1536357 18426762 ~ 18483776 (-)
LOC120552536 fbxl7 other upstream 779969 20835178 ~ 20862688 (-)
rbis LOC101064519,LOC103367294,LOC102312013 other upstream 1162471 21217680 ~ 21221667 (-)
tfr1b NA other upstream 1934808 21990017 ~ 22011086 (-)
LOC120552473 NA other upstream 2059173 22114382 ~ 22120611 (-)
smpx smpx other upstream 2147558 22202767 ~ 22218381 (-)

Expression


Co-expression Network