LOC120552718


Basic Information

Item Value
gene id LOC120552718
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 23068720 ~ 23070897 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039790942.1
GTGCTTCTCTAAACCTCTCTGTGAAAGCTGCTACCCCTAAAAACGTTCACCATCGTAAGCATAAGAAGCAATTTATTGAGCCTGAGCCATACCAGAAAGGCTTCCCGCCCAAAAGACGCAACCATTCCTTTGTTCCGGTTTCATCTTACCCGgccactgtatcttatgatcctaacacagttgcagaggtgagaaacccttttgtatctagcagaatatatagaataaattagatgtcttgcaaacagctaacacacaattGACTGGTTTGGTCACAGACTTCGGAACAACGCTGGCCAGCCAGGTCAGAGCTAACACGCATTTGGTTGATTTGGTCACAGGTTTTGGCACCACGCTGGCCAATCAGGTCAGCTCTCTCAATACGCTGATTGTACCTATGATAGTATGCCTTAAAAAGACTATGAATATGCccccacagtaaaaaaaacaggctatagtttgtgtacaatataaaaaaaatttaaaaaaaattaaaaagaaaatgccaccgccacccaaaaaaacaaaaaaatctgaacccttaggtgtgtgtgacgatAGTAGTGACGAGGAACTAGAATGGCCATGCGAGGACGATTACACAAGAGCAGTAAGCAATCCTCAGGATTTTGCACGTTTGTGTGCTATACATGCCAAAATATTCGAAGCCTGGGCCCAATCTATGCCTAGTGCTAGCGCTAGTGAAAGCAAcagtgagaaaacacaagaattagATAGTCCGTCCCCTGAACAGTTGTCACATAATGGTCCTTCAGACGTGTATTCCAGCAATACACCGTCCAATACAGACGCTACACAATCATCAAATACAGACCCCCCAGACATAGATCAGAGTAATAAGAGACCTGCATGTTTTCCGAGTGTTCAGCCGTCAAAACGATCCTGTACAGATGAACAGACCGGTCCCCAACCGTCCACAAGCGCTTATAGTACCCCTCCATCACCCACAGAAAATCCTCAGGGTGGTGTGCAGTGTGGTGCGGGGCGCGTTTCTAAGGTAACATCCGAAATAGCATCCAGACAGATACCCCTTTTTAATGCTGCTGAATTTCGTCAAGATGTCGACCTGCgaaatattgatttgactgaTATCGGTAGTGTTCCTGAAAGGGTGTATAGCACCTTAACAGATTTAATAGCGAGGGCTTTGGGCAATGCAACACAGGACAGCGTTTTAAATGTTGAGTTAAGGGGGCCAGCCGTAGATGTCCCTATCCAAACAATGTTGAACTCAGGCGATGgctataacacagacacatttctggagcAAGTCGCACAAGCAATGCAGAGTAACGATAATTCACTGACCGATGACTCTTTAGAATTAATTGTGACAATAGCGCGCAATATGTCGGGAGGGGGTGTCGGGAGACGTCGAAAACTAGGAAGCATTGGTTACGATCAAATattgtcagaaaaaggtaatgCTTTGTATAACCCCAAGAATAACGCTGGTAACGAcaatctctgcttttctctctgcctggcACATTATGTAAATAGCAGATGGTCGCATGATGAGAAGATGAATTATGCTAAGCATCTGCATAGTGATTTGGGTTTTGACTACACACATAAGGTTTCGTTCTCTGATGTTGAcagatttcagaaacatttgaaaatgaaaattgtgatATTCCATCATGTAGCCGGATGTAAAAAACCCACGATCTTCAAAACGCACGACCAACCAGATGTGAAAACAGCATGGTTGTATTTGCATGACGAACATTATTATCTCATCGTAAATAAAACGGCTTTTTTTGGGGCGTCGTACGTTTGCGATGGGTGTTACAAGACCTACCAGAACCCTCTGGGGCACCTTTGTAGTTGGCtttgtaatgtgtgttacacTGATTGTATACCTGACAAGACCATTAAATGCACAGGCTGTAAACGCATATGCAAATCGcaacagtgttttgaaaaccataaaaaCCCGACGTGGAAACACGGGCTTTACACCCCCACTATAATCAAATATTGCGGAGTCCTGTCACGCGAACATATCGTGTGTcgaaaaatccacacagctgtaaaaaACCTAAATGCCTACATTGTAGAGAGCCTTTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039790942.1 True 2095 mRNA 0.43 2 23068720 23070897

Neighbor

gene id symbol gene type direction distance location
LOC120552717 LOC104965202,LOC103365305 coding downstream 147464 22912562 ~ 22921256 (-)
LOC120552328 epc1,LOC102784371,LOC100694393 coding downstream 180489 22841027 ~ 22888231 (-)
LOC120552530 LOC103365300 coding downstream 266971 22697027 ~ 22801749 (-)
ggh ggh,LOC100704938,LOC108234706,LOC101480685 coding downstream 371856 22691030 ~ 22696864 (-)
LOC120552124 NA coding downstream 380318 22679691 ~ 22688402 (-)
LOC120552656 cdh18,LOC102310872 coding upstream 57747 23128644 ~ 23308035 (-)
cdh10a LOC102783614,LOC100705471,LOC101477094,LOC102310056,LOC102199257 coding upstream 562786 23633683 ~ 23666857 (-)
drosha drosha coding upstream 1122481 24193378 ~ 24297851 (-)
mc4r LOC104930272,LOC103365861,LOC104961440 coding upstream 1286712 24357609 ~ 24361216 (-)
rnf152 rnf152 coding upstream 1589214 24660111 ~ 24723840 (-)
G221933 NA non-coding downstream 28586 23039849 ~ 23040134 (-)
G221928 NA non-coding downstream 86369 22981964 ~ 22982351 (-)
G221926 NA non-coding downstream 108060 22959366 ~ 22960660 (-)
G221857 NA non-coding downstream 728850 22337075 ~ 22339870 (-)
LOC120552529 NA non-coding downstream 733236 22325273 ~ 22335484 (-)
LOC120552653 NA non-coding upstream 57 23070954 ~ 23071831 (-)
G221950 NA non-coding upstream 48881 23119778 ~ 23120288 (-)
G221960 NA non-coding upstream 185592 23256489 ~ 23256834 (-)
G221962 NA non-coding upstream 243791 23314688 ~ 23314893 (-)
G221999 NA non-coding upstream 601963 23672860 ~ 23673189 (-)
smpx smpx other downstream 850339 22202767 ~ 22218381 (-)
LOC120552473 NA other downstream 948109 22114382 ~ 22120611 (-)
tfr1b NA other downstream 1057634 21990017 ~ 22011086 (-)
rbis LOC101064519,LOC103367294,LOC102312013 other downstream 1847053 21217680 ~ 21221667 (-)
LOC120552536 fbxl7 other downstream 2206032 20835178 ~ 20862688 (-)
LOC120552322 cdh12,LOC108234660,LOC100695194,LOC101477368 other upstream 330646 23401543 ~ 23519526 (-)
avl9 avl9 other upstream 1725692 24796589 ~ 24854888 (-)
msl2b msl2,LOC102304425,LOC102778660 other upstream 1892520 24963417 ~ 24968106 (-)
LOC120552232 LOC103371349 other upstream 1964987 25035884 ~ 25086902 (-)
LOC120552299 NA other upstream 2485576 25556473 ~ 25562540 (-)

Expression


Co-expression Network