LOC120552735 (nebl)


Basic Information

Item Value
gene id LOC120552735
gene name nebl
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 27136771 ~ 27189544 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039790963.1
TCGGCCCTGGAGGTGATCACTGTGCTTCTCGACCACGTGCTTGCAGTTGTTTTCTCCCAGCCTCCGCTAGCTTGCTGCTGCCAATGATCGGTCCCAGCAGCGCAGCATCCAGCCTTCACACCGGACGGTGAGTCGCTGAGTGAGGGAGCAGAGCCGCCGTTTCTCCGCTACGTTTCCatctttttttcccactttgTTTACAGTGTGAAGAGTGGCTCAGCGGAGACATTTTGGGACTTTCGTTCTGGACAACATTTTACATCTCTCGAATAACAAGTGGAATTAAGCCTTTGGGGAGCACAGAGGAGGTTTGGGAGGATGAACCCCCAGTGTGCCCGCTGTGGGAAGATTGTCTACCCGACGGAGAAAGTCAGCTGCCTGGACAAGAACTGGCATAAAGGATGCTTCCACTGCGAGGTTTGTAAGATGACCCTGAACATGAAGAACTACAAAGGCTACGACAAGAAGCCCTACTGCAATGCACATTACCCCAAGACGTCGTTCACCACCGTGGCCGACACACCAGAGAACCTGAGACTGAGACAGCAGAGTGAGCTACAGagccagCACGTGGAGATGAAAACAAACGCCCAGGTGTGTCAGTGGAAGCTGCTCCGACTGCTTCCTGGAGACCAACAGGCCCATCCTCCATGA

Function

symbol description
nebl Predicted to enable actin filament binding activity. Predicted to be active in focal adhesion. Is expressed in heart. Human ortholog(s) of this gene implicated in dilated cardiomyopathy. Orthologous to human NEBL (nebulette).

NR:

description
PREDICTED: LIM zinc-binding domain-containing Nebulette

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039790963.1 True 654 mRNA 0.54 6 27136771 27189544

Neighbor

gene id symbol gene type direction distance location
LOC120552734 nebl coding downstream 7377 27046827 ~ 27129394 (-)
LOC120552564 nebl coding downstream 82411 26987325 ~ 27054360 (-)
LOC120552563 NA coding downstream 155897 26972847 ~ 26980874 (-)
ssr1 ssr1,LOC104966062 coding downstream 168357 26945450 ~ 26968414 (-)
trnai-aau_34 NA coding downstream 668939 26467759 ~ 26467832 (-)
LOC120552579 NA coding upstream 5786 27195330 ~ 27205153 (-)
LOC120552591 NA coding upstream 34210 27223754 ~ 27224992 (-)
LOC120552593 NA coding upstream 120468 27310012 ~ 27312365 (-)
LOC120552567 NA coding upstream 1113790 28303334 ~ 28355647 (-)
LOC120552600 NA coding upstream 1187535 28377079 ~ 29112293 (-)
G223534 NA non-coding downstream 48574 27087733 ~ 27088197 (-)
G223518 NA non-coding downstream 77267 27005323 ~ 27059504 (-)
G223515 NA non-coding downstream 145021 26982784 ~ 26991750 (-)
G223522 NA non-coding downstream 159477 26976478 ~ 26977294 (-)
LOC120552561 NA non-coding downstream 207750 26917333 ~ 26929021 (-)
G223552 NA non-coding upstream 63954 27253498 ~ 27254197 (-)
G223551 NA non-coding upstream 66316 27255860 ~ 27264163 (-)
G223554 NA non-coding upstream 77704 27267248 ~ 27267746 (-)
G223555 NA non-coding upstream 85747 27275291 ~ 27277548 (-)
G223559 NA non-coding upstream 86204 27275748 ~ 27299292 (-)
LOC120552733 LOC100703031,LOC102297688,LOC106527684,LOC106916028,LOC104953541,LOC106590371,LOC101467375 other downstream 230439 26559435 ~ 26906332 (-)
LOC120552560 NA other downstream 626644 26483929 ~ 26510127 (-)
G223435 NA other downstream 660860 26471704 ~ 26475911 (-)
G223433 NA other downstream 727414 26404001 ~ 26409357 (-)
G223395 cul1,LOC107713664 other downstream 918447 26216885 ~ 26218324 (-)
LOC120552569 NA other upstream 68829 27258373 ~ 28498012 (-)
rreb1a rreb1 other upstream 326416 27515960 ~ 27625569 (-)
G223640 NA other upstream 451020 27640564 ~ 27685979 (-)
LOC120552596 NA other upstream 504796 27694340 ~ 27700381 (-)
G223645 NA other upstream 549238 27738782 ~ 27739972 (-)

Expression


Co-expression Network