fzd8a (fzd8,LOC104927254,LOC104956203)


Basic Information

Item Value
gene id fzd8a
gene name fzd8,LOC104927254,LOC104956203
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 7439940 ~ 7442699 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039790976.1
CCGGGACTAAGGTGGGACGAGCCGACTGAATGTAGTCGCTGTGTTTTGAAGAAAAGAAACCAGGCCCACATCTTTCCGTTTGTAGCGATCGGACAGtcgcatttgtttttaataacatACTGTCTGAGGATACTGAAAGCAGTTTCCAGAAGAAGGTGGATTCTCCTCTCAGCCATCTTGACTGCTGCTCGCCGCCCTGAAgcctgttttctctcctcctcctcctcctcttcctcagctgAAAGTAAACACGGCTTGCCCATTGCTTGCAACTCCGTGCAAGATCCTGAGAGAAGCGAGATGGGCTCGCTGCGCAACATCTAACCGGACCAGAGGCAAAAGCAGACGGCTGAGAggatttatttctgttgttaCCCGAGCAGAAGAAGGGGGATGCAACGCGCCGGAGGGATGGACCTGTTTGGGATTTACCTGCTCCTCTCACTCGCTCTCCTGCCCCGATCGAGCTGCACCACGGCCAAGGAGATCACCTGCCAGGAGATAGCCGTGCCCCTGTGTAAGGGGATCGGCTACAACTACACCTACATGCCTAACCAGTTTAACCATGACACGCAGGACGAGGCTGGACTGGAGGTGCACCAGTTCTGGCCTCTGGTCGAGATTCAGTGTTCACCTGACCTGAAGTTCTTCTTGTGCAGCATGTACACCCCGATCTGCCTGGAGGACTATAAGAAACCTCTTCCCCCGTGCCGGAGCGTGTGTGAGAGAGCCCGGGCTGGCTGTGCGCCTCTCATGAGGCAGTACGGCTTCCCCTGGCCGGACAGGATGAAGTGCGACCTGCTGCCGGTGCAAGGCAACCCAGACACTCTGTGCATGGACTACAACAGAACCGACTCCACTACAgtctctcctgtcctctccaAACCCACCAACCATCCCGGTAAGGGTAACAATCCACCTAAAAATAAGCCCAGCCGACCCGACGCGCCTGGGAAATACAAGCCGCCTGTCGCCCCATGTGAGCCGGGGTGCAAGTGTTTGGAGCCTATGGTGCCGGTGAACACGGACCGTCACCCGCTCTATAACCGTGTCAAAACGGGTCAGATCACGAACTGCGCCATGCCGTGCCACAACCCTTATTTTACGCACGACGAGAGAGCATTCACCGCCTTTTGGATAGGACTTTGGTCCGTGTTGTGCTTCGTGTCAACTTTTGCCACGGTCGCCACTTTCCTCATCGACATGGAGCGGTTTAAGTATCCAGAGAGACCAATCATCTTCCTCTCAGCCTGTTACATGTTTGTGTCAGCCGGCTACATTGTCAGACTGATCGCCGGGCACGAGAACGTGGCGTGCAACCGGGAGTTCGATGTGGAGCACATCCACTATGAGACCACCGGCCCCGCGCTCTGCACTGTGGTCTTCCTCCTTATTTACTTTTTCGGCATGGCCAGCTCAATCTGGTGGGTCATCCTGTCTCTGACCTGGTTCCTCGCAGCCGGGATGAAGTGGGGCAACGAGGCGATCGCCAGTTACTCCCAGTACTTCCACCTGGCCGCCTGGCTCATCCCCAGCATGAAGTCCATTGCGGTCCTGGCGCTGAGCTCCGTGGACGGAGACTCGGTGGCTGGCATTTGCTACGTGGGGAACCAGAACCTGGACAACCTGCGGGGCTTCGTTTTAGCCCCTTtggtgatttatttattcataggCACTATGTTCCTCCTGGCCGGATTTGTGTCCCTGTTCAGGATCCGCAGCGTCATAAAACAAGGTGGCACCAAAACTGACAAACTAGAGAAGCTGATGATTCGAATAGGCATCTTCACAGTGCTCTACACGGTGCCAGCCACCATCATAGTCGCCTGTTACTTTTATGAGCAGCACAACAGGCAGAGCTGGGAGATCACACACAACTGCTCCAACTGTTTGTTAGAGAGGGACCGCAGGAGTCCGGACTATGCCGTTTTTATGTTGAAGTACTTTATGTGCCTTCTGGTGGGCATCACGTCCGGAGTGTGGATCTGGTCTGGTAAAACTTTGGACTCCTGGAGGACTTTTTGCACCAGGTGCTGCTGGGGCAGTAAAGGCACCAGTGGCTCCATGTACAGCGACGTGAGCACAGGACTAACGTGGAGGTCAGGAACGGCCAGCTCCGTGTCTTGCCCCAAGCAGATGCCATTGTCCCAGGTTTgaatgaggggggaaaaaagcagcTTATGGGGACTGCTAATTGTTTGGGAGATAACCCATCACTCCCTGTCTTAAGCAATTTGCATAGTAATGAACTGCTGCTgaggtgccccccccccccaattctCCCAAACATCTACACACCTCTGTGGGGAGAGGTGGTTGAAACAATGTACCTGGCATTCACACAGGTTAATTCCTCCCTGTTTATATGTATTAGAGGTACAGACTGTAGCTTTTTACGCAACCTGGGCATTACTTGTTGTAGGCAGAGTGACCGGTTTGTTCCTAACTAGCTTCATACAAAGAGCATTTGGGTTGTTATTGCCATTTTATCTACATAGTGCCAGATAACATTGTATAATTCAATCACGTCAAAGATGGTTTAAATTAAGCCTTAATAGTGCCCAAGTGTTTTACGGGTCATTCATTTTGtaatttcaaatgtatttatataaaagttatgtaaaaaaaaaaaagtgtacattTGTGTATAAAAGAAAACTTTATAAGCTATTGTAAATTTGTACAAAGTGTAGATGTCTCTTTTTGTGAGAAAGCAAATATgacctttattttgacaatAAAACCTTTGATAAATCTCAA

Function

symbol description
fzd8 Enables PDZ domain binding activity; Wnt-activated receptor activity; and ubiquitin protein ligase binding activity. Involved in canonical Wnt signaling pathway. Predicted to be located in Golgi apparatus. Predicted to be part of Wnt-Frizzled-LRP5/6 complex. Predicted to be active in plasma membrane. Predicted to be integral component of membrane.

NR:

description
frizzled-8-like

GO:

id name namespace
GO:0060070 canonical Wnt signaling pathway biological_process
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0021529 spinal cord oligodendrocyte cell differentiation biological_process
GO:0021531 spinal cord radial glial cell differentiation biological_process
GO:0060898 eye field cell fate commitment involved in camera-type eye formation biological_process
GO:0021879 forebrain neuron differentiation biological_process
GO:0016021 integral component of membrane cellular_component
GO:0042813 Wnt-activated receptor activity molecular_function
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG:

id description
K02375 FZD5_8, fz2; frizzled 5/8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039790976.1 True 2760 mRNA 0.51 1 7439940 7442699

Neighbor

gene id symbol gene type direction distance location
cul2 cul2,LOC102787920 coding downstream 79852 7343067 ~ 7360088 (-)
trnaw-cca_34 NA coding downstream 98045 7341824 ~ 7341895 (-)
LOC120552354 pard3 coding downstream 104488 6952829 ~ 7335452 (-)
trnaw-cca_33 NA coding downstream 137173 7302696 ~ 7302767 (-)
trnaw-cca_32 NA coding downstream 138800 7301069 ~ 7301140 (-)
pfkpa LOC101472402,LOC100702375,LOC102201923,LOC102790125,LOC104924699 coding upstream 419233 7861932 ~ 7888999 (-)
LOC120552408 wdr37,LOC102292542,LOC101470374 coding upstream 861124 8303823 ~ 8326855 (-)
LOC120552407 cpne3,LOC104924704,LOC102292005,LOC108248831 coding upstream 892088 8334787 ~ 8347251 (-)
LOC120552411 LOC103369038,LOC104941959,LOC108248835 coding upstream 905257 8347956 ~ 8361373 (-)
LOC120552414 LOC101468454,LOC102290369,LOC102196333,LOC103482264,LOC106914574 coding upstream 920775 8363474 ~ 8372337 (-)
G218199 NA non-coding downstream 984974 6426008 ~ 6454966 (-)
G218177 NA non-coding downstream 1185964 6253146 ~ 6253976 (-)
G218176 NA non-coding downstream 1210947 6228775 ~ 6228993 (-)
G218166 NA non-coding downstream 1428875 6010337 ~ 6011065 (-)
G218165 NA non-coding downstream 1450010 5988889 ~ 5989930 (-)
G218327 NA non-coding upstream 138858 7581557 ~ 7581756 (-)
LOC120552501 NA non-coding upstream 148998 7591697 ~ 7593836 (-)
G218332 NA non-coding upstream 190872 7633571 ~ 7634213 (-)
G218335 NA non-coding upstream 237451 7680150 ~ 7680411 (-)
G218347 NA non-coding upstream 297574 7740273 ~ 7740524 (-)
G218085 LOC107687935 other downstream 1739364 5700229 ~ 5700576 (-)
G218019 NA other downstream 2403236 5027505 ~ 5036704 (-)
G217837 NA other downstream 3498611 3936010 ~ 3941329 (-)
G217780 chchd7,LOC102799933 other downstream 3735583 3692952 ~ 3704357 (-)
f3a NA other downstream 3983896 3437802 ~ 3456044 (-)
G218453 adarb2 other upstream 752230 8194929 ~ 8195879 (-)
G218471 NA other upstream 987765 8430464 ~ 8430930 (-)
prkdc prkdc other upstream 1355082 8797781 ~ 8851726 (-)
LOC120551928 LOC104943218,LOC103369878,LOC100710535,LOC102301415,LOC101469805 other upstream 1514710 8957409 ~ 8970638 (-)
cngb3.1 LOC103363254,LOC102786718,LOC108428960,LOC104948783 other upstream 2390763 9833462 ~ 9848241 (-)

Expression


Co-expression Network