LOC120552750 (oprk1,LOC104949654,LOC103363868)


Basic Information

Item Value
gene id LOC120552750
gene name oprk1,LOC104949654,LOC103363868
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 19059707 ~ 19065576 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039790978.1
ACATGCGCACCGCCTCTCCATCGGTGCGTGTGCACGAGAGTCCGCAAAGCCGCTGCTGCTCCTCTCCGCGCGCAGTACCATCCAAAAACTTTGATGAGCTGTAACCTTCACCAAGGAAACAAAACAACCCGAACTGAATacataaactatatatatatatataaatatatattttacaggTTGCGTCCGCTTATTTGGGTCGATCAAGGTGTGAAAATGGAAAGCACTCCGGTTGAAATTTTCAAAGAAGACAATAAGTGCTTCTCTGCGCTGTTGGAAGACTGTCCGGTGAATTCTTCAGCCTGGGTGTCCGGATACTCCGAGAGCCGCAATATGACCCACGATGATAGCTGGGAGGCGGAGGGCATGTCTCCCATCATCCCCATCATCACTGCAGTCTACTCCGTGGTGTTTGTGGTCGGCTTGTTGGGCAACTGCCTCGTCATGTATGTGATCATCAGGTACACAAAGATGAAGACAGCCaccaacatttacattttcaacTTAGCACTCGCTGATGCCCTTGTCACCACCACAATGCCTTTCCAGAGCACGGACTACCTGTTGAATACCTGGCCCTTTGGTGAGGTGGTCTGCAAGGTCTTCATCTCCATCGACTACTACAACATGTTCATTAGTATCTTCACCCTCACCATGATGAGTGTGGATCGCTATGTGGCTGTGTGCCACCCGGTGAAAGCCCTGGACTTCCGCACTCCGATCAAAGCCAAGATGATCAACGTGTGCATCTGGATCCTATCCTCAGCTGCAGGGATACCTGCTTTTATCCTGGGTGGCACTCAGACGAAGAGTGACATAACTGAGTGTGCCTTACAGTTCCCAGAGCCATACGTTTACTGGGACACACTGATGAagatatgtgtgtttgtctttgccTTCGTCGTGCCTGTGCTCATCATCACCGTGTGCTACTCTCTCATGGTCCTGAGGCTGAAGAGCGTCCGAATGTTGTCCGGTACGCGGGAAAAAGACCGCAACCTGCGGCGGATCACgcggctggtggtggtggtggtcgCTGTGTTTGTAGTCTGCTGGACTCCCATTCACATTTTTATCCTGGTCAAGGCACTTGTGAGCATACCTGAAACCACCGCCATCATGGCCGCCTACTTCTTCTGCGTTGCTCTGGGCTACACAAACAGTAGCCTGAACCCTGTCCTGTATGCCTTTCTGGATGAGAACTTCAAACGCTGCTTCAAAGACTTCTGCCTCACGGCCGAACTGAATGGGGAGAAGGTGTCAGGAAGCAAGAAGACCCCCAGCAGTGTGCGTGAGGCCGCTGTTGCCCTGGAGAACTCAGATGGGACTAGAAAGCCGACATGACTAGCAGTGGAACTGTCTTCAATTTCCCACATTGGAAAAGAAGACTCACATGACCTGGGCCTAACCCACGTCACATCTGCAATGTAGTTTTGACTCTATTGCAGAATTCATTTGTATTATCACTTGGGGTTTAATCAGTGCCACCATTTATATGATTTAATTTTAACAGATCAAATTAATTATAAGTTGTGTTCCACTTTGATTAATTTTTCCCCTCATGGCAGTTGTTATAAAGATTGCGTATTTACTGTAGGTGGATGTGAAATTGAAAATAATTTGGTTCAAGCAGATACAAAGGCCACATGTGATTAAAGTTTGTCTTTATTTGTCTATGCTTTTCAAACCATTCTCTGTCCTTGCTAGAAAGTATATTATTAAGAAAGAACTgaatttattaatttttaataGGCGGATGTTTACCCATGACTAGCAAACTGCCCCATGATCATCTCTTTACAATTGCTATGCTGTCTGCTACTTCAGTACCATGGACAGCGTCATGAATTGGTCAGTACACAGCACAGTTTCAGAGTCATGGTCGGAGCCATAGATTAGAATTTGAACAAACCTAGTCAGATAAAGGATCAGTGAGACAGACTAGACTAACATATTTAGCTACTAAGGGATGGAGAGGGGGATGGCAGGTTAATATGCCTtcattttggtcattttgctaaCAAGAGGGATGGCATCCCCCCTCAAATCTCCTACGGACTATAAGTTTTCCTATAAGTGGGACGTCCCCAAACCATGTGGCACATCCCAAACAATATTGCAAAATGTCAACATTTCTCAAGAAAATTGTTGATTATTTAATAGAAAAATTACAAAGAGATGGATGAAAAATGTAACCTGATTGGATCCTTCACATAGTATACTTGTTACATCAGTGTTTTTATGCTCATTTATTTGCTTTATGTTTCTCAAATTCTATCTTTTCCTGTAATTTCCTCCAATAATGTTTTTATTGCCAAATGTGCCTTTGACAGTCCAGGATAACAAATGTTTATAGCAGCCGAAAATGATTTCAGTAATGATTACTAGGGTCAAAcagcagctgttttttttttatacacaatGTCACAGAAGTGAGTCATGTTGGACTTTGATGTTACTGGGAGGTAAACAAAAAAGTATCCAAACTGCATCAAAGGAAGTTTATTGAtgagaaaacttaaaaaatccTGGACTTGAATGTGCATTTAAAATTTGACAGAGGGCTCTCTATCAGCTTTGATTCTGGAGTTGTGTCCAGTTTGATAAGTTGTTCAATTAATGGTATATAATTTAATCACATGTGCTTTGTGAAATGCTTGTGCTATTATTGTGGGGAGATGTTCTCATCAGTGCAATCTGAAAACATGAGTATAGCTGTTTAAAGTTGGTTAAATACAGTGTATTTATTCATCTGTACAGTTTGATGGTATGTATACATAATTTTGTATAGACAACAAAAAATATTGCACAGACATCATttaaaaatactgtatgtgtagcaTGTCAATGATCATTGCTATGATAGTATAATGCAACATAGGCAGCCTGTATGCTTTATGGACTGTGCTGTTATTTCGAATGTACTGCAAATAGATTCTGTATTATATAAACATATGATTACCCATGGTATTAACTCCTGTAACTCATTAGCtaatttttatgtaattcagtAGTTAAAACCATTTTCATGAACATTTTGTTTCACTCTCAAGTCCCTGAACCAGAGCTTTGTTGTTTTGGGGCTTACTGTTAACAAATCTCTATGTATACTggcataaaaatatataaagcacATAAGTTCTGTTACTTGACAAAACAATAAGAGACATTATCCTAAGGAACCACACTGTGACCAAGACattgttattttattcttaGTCTCTGTGTTTACTGTTTAAATCTGTTGCTGCTGTATATTGTCTTTGACTGCTGCCAACCGAACAGCAGATGTATTGATCAAAACATCCTGTGTGTAAAGCACTTAATATTAAAGCAAGTTTAACAAATCCA

Function

symbol description
oprk1 Enables peptide binding activity. Predicted to be involved in G protein-coupled opioid receptor signaling pathway; neuropeptide signaling pathway; and sensory perception of pain. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in neuron projection. Predicted to be integral component of plasma membrane. Is expressed in central nervous system. Orthologous to human OPRK1 (opioid receptor kappa 1).

NR:

description
PREDICTED: delta-type opioid receptor-like

GO: NA

KEGG:

id description
K04214 OPRK1; kappa-type opioid receptor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039790978.1 True 3351 mRNA 0.41 4 19059707 19065576

Neighbor

gene id symbol gene type direction distance location
chmp5b chmp5,LOC104949656,LOC108230516 coding downstream 1631 19054260 ~ 19058076 (-)
myom1b myom1,LOC100698284,LOC102794243 coding downstream 22874 19006643 ~ 19036833 (-)
LOC120552316 lpin2 coding downstream 54542 18989181 ~ 19005165 (-)
LOC120552191 yes1 coding downstream 206091 18831587 ~ 18853616 (-)
enosf1 enosf1 coding downstream 232825 18821982 ~ 18826882 (-)
LOC120552400 NA coding upstream 3587 19069163 ~ 19070616 (-)
lypla1 lypla1 coding upstream 46620 19112196 ~ 19118982 (-)
LOC120552661 esco1,LOC102306999,LOC105019393,LOC107732058,LOC107599690 coding upstream 116474 19182050 ~ 19195523 (-)
vps41 vps41 coding upstream 131007 19196583 ~ 19213652 (-)
ankha ankh coding upstream 250007 19315583 ~ 19330554 (-)
G220972 NA non-coding downstream 16491 19040265 ~ 19043216 (-)
G220893 NA non-coding downstream 229722 18829751 ~ 18829985 (-)
G220888 NA non-coding downstream 243329 18815906 ~ 18816378 (-)
G220860 NA non-coding downstream 319091 18740417 ~ 18740616 (-)
G220839 zfand1 non-coding downstream 436322 18622691 ~ 18623385 (-)
LOC120552156 NA non-coding upstream 251078 19316654 ~ 19317227 (-)
G221086 NA non-coding upstream 307015 19372591 ~ 19374516 (-)
G221088 NA non-coding upstream 371390 19436966 ~ 19439539 (-)
G221090 NA non-coding upstream 380469 19446045 ~ 19446294 (-)
G221095 LOC102309907,LOC101472733,LOC102788342,LOC101061645,LOC104929597 non-coding upstream 451796 19517372 ~ 19544392 (-)
mettl4 mettl4 other downstream 110212 18938913 ~ 18949495 (-)
LOC120552352 colec12,LOC102798044 other downstream 248763 18772977 ~ 18810944 (-)
G220833 NA other downstream 361737 18610236 ~ 18697970 (-)
si:ch73-174h16.4 LOC103364270,LOC104947970 other downstream 575931 18426762 ~ 18483776 (-)
G220412 csrnp1,LOC104937158,LOC102793366 other downstream 2184407 16874649 ~ 16875300 (-)
G221048 ankh other upstream 250015 19315591 ~ 19326894 (-)
LOC120552536 fbxl7 other upstream 1769602 20835178 ~ 20862688 (-)
rbis LOC101064519,LOC103367294,LOC102312013 other upstream 2152104 21217680 ~ 21221667 (-)
tfr1b NA other upstream 2924441 21990017 ~ 22011086 (-)
LOC120552473 NA other upstream 3048806 22114382 ~ 22120611 (-)

Expression


Co-expression Network