LOC120551977


Basic Information

Item Value
gene id LOC120551977
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 852609 ~ 854872 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005637948.1
GAGTTGAATGCAATGCAAATCCTGCAAATTCACCAACCTCAAAGAAGCTGTTCTCCTGAAGCACTAGGCCTACTGTCTGTATCACAGAGGCAGGCAGAGTTCTATCGGATCACCAACAAGAACCTACTAGACAACTTTAGAGCAGCCATTAATCTGGACACTCCAGGACTGCTTAGACTCTATCGGGCTAGGAGGCCAGCTATTCCGTCTGAGATGGATCAACTCCTTAAGGGACTGGATGAAGAGACCAATGACATCACAGCACACACAGGCTGCAGCCTTGAAGGGCCTTCCTTTGTATATCTGTGAAAGTCACGAGAAGCTGTACAGGAGTTGTCTGGATACTGACCCAGAAGAGGAGCAGACAAAGCCTCATTGTGGGGATACTTACTATGGAGGATGATCAAAGTACGGCTCCGGCAAGTTGCAAATGTAGCTGTGGTTCTAGAAGAAGACATCGTCTTACAAGACCTCCCTGACCTGCTAACGGCCTTTGTTTTGCTCTTTGGGCTGATATGCCTCAAACATTTAGTTTCCCAAGGAACTGAGGTACACCTTCGAAACATTTCAGAAGTTGTTAACTAATCTAACCTTGCTGTCCTTACTAAGTATATAAGTAAAAAAATTAGAATATGTTATCTGACATCCACAACTACTACTGTTcagtaggggtgcacgattcagaaaatgtcacaattcaatatcgattttcatagggct

Function

GO: NA

KEGG:

id description
ko04113 Meiosis - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005637948.1 True 720 lncRNA 0.44 3 852609 854872

Neighbor

gene id symbol gene type direction distance location
LOC120552693 NA coding upstream 398074 453375 ~ 454535 (+)
LOC120551998 NA coding downstream 668522 1523394 ~ 1529309 (+)
trnaq-uug_4 NA coding downstream 714515 1569387 ~ 1569454 (+)
trnal-cag_5 NA coding downstream 716791 1571663 ~ 1571745 (+)
trnaq-cug_17 NA coding downstream 717281 1572153 ~ 1572224 (+)
trnal-cag_6 NA coding downstream 718279 1573151 ~ 1573233 (+)
G217250 NA non-coding upstream 137289 715121 ~ 715320 (+)
G217246 NA non-coding upstream 163264 689102 ~ 689345 (+)
LOC120552453 NA non-coding upstream 245321 597229 ~ 607288 (+)
G217236 NA non-coding upstream 289225 556045 ~ 563384 (+)
G217230 NA non-coding upstream 404597 447508 ~ 448012 (+)
G217268 NA non-coding downstream 31146 886018 ~ 1348824 (+)
G217326 NA non-coding downstream 497288 1352160 ~ 1353584 (+)
G217352 ift74 non-coding downstream 662622 1517494 ~ 1521537 (+)
G217378 NA non-coding downstream 798305 1653177 ~ 1731066 (+)
G217384 NA non-coding downstream 895601 1750473 ~ 1835068 (+)
zcchc2 zcchc2 other downstream 607878 1462750 ~ 1505215 (+)
G217377 NA other downstream 814290 1669162 ~ 1675400 (+)
G217606 svil other downstream 2151411 3006283 ~ 3021642 (+)
LOC120552392 mtpap other downstream 2365743 3220615 ~ 3233822 (+)
G217723 cnn3 other downstream 2640578 3495450 ~ 3543785 (+)

Expression


Co-expression Network