LOC120552156


Basic Information

Item Value
gene id LOC120552156
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 19316654 ~ 19317227 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005637963.1
agagaaactcgaagtttattgaagaaaacctgctcccgaccagTTTGTAATTGGTTAGCGCTGATAACCAGAAGCATAAGAGGTTATTGGATTCAGGAGGCAATGCAAGCTCCTAAATACTTCCATGTTCACATGAGGACTATTACTCACCCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005637963.1 True 154 lncRNA 0.42 2 19316654 19317227

Neighbor

gene id symbol gene type direction distance location
vps41 vps41 coding downstream 103002 19196583 ~ 19213652 (-)
LOC120552661 esco1,LOC102306999,LOC105019393,LOC107732058,LOC107599690 coding downstream 121131 19182050 ~ 19195523 (-)
lypla1 lypla1 coding downstream 197672 19112196 ~ 19118982 (-)
LOC120552400 NA coding downstream 246038 19069163 ~ 19070616 (-)
LOC120552750 oprk1,LOC104949654,LOC103363868 coding downstream 251078 19059707 ~ 19065576 (-)
fam49bb fam49b,LOC104954579,LOC105915818,LOC103377397,LOC107085391 coding upstream 158653 19475880 ~ 19514037 (-)
asap1b asap1 coding upstream 201303 19518530 ~ 19585448 (-)
chpf2 chpf2 coding upstream 322629 19639856 ~ 19648801 (-)
si:ch73-173p19.1 LOC103363515,LOC104954586 coding upstream 341662 19658889 ~ 19666720 (-)
kif9 NA coding upstream 572455 19889682 ~ 19908076 (-)
G220972 NA non-coding downstream 273438 19040265 ~ 19043216 (-)
G220893 NA non-coding downstream 486669 18829751 ~ 18829985 (-)
G220888 NA non-coding downstream 500276 18815906 ~ 18816378 (-)
G220860 NA non-coding downstream 576038 18740417 ~ 18740616 (-)
G220839 zfand1 non-coding downstream 693269 18622691 ~ 18623385 (-)
G221086 NA non-coding upstream 55364 19372591 ~ 19374516 (-)
G221088 NA non-coding upstream 119739 19436966 ~ 19439539 (-)
G221090 NA non-coding upstream 128818 19446045 ~ 19446294 (-)
G221095 LOC102309907,LOC101472733,LOC102788342,LOC101061645,LOC104929597 non-coding upstream 200145 19517372 ~ 19544392 (-)
G221138 NA non-coding upstream 283479 19600706 ~ 19600939 (-)
mettl4 mettl4 other downstream 367159 18938913 ~ 18949495 (-)
LOC120552352 colec12,LOC102798044 other downstream 505710 18772977 ~ 18810944 (-)
G220833 NA other downstream 618684 18610236 ~ 18697970 (-)
si:ch73-174h16.4 LOC103364270,LOC104947970 other downstream 832878 18426762 ~ 18483776 (-)
G220412 csrnp1,LOC104937158,LOC102793366 other downstream 2441354 16874649 ~ 16875300 (-)
LOC120552536 fbxl7 other upstream 1517951 20835178 ~ 20862688 (-)
rbis LOC101064519,LOC103367294,LOC102312013 other upstream 1900453 21217680 ~ 21221667 (-)
tfr1b NA other upstream 2672790 21990017 ~ 22011086 (-)
LOC120552473 NA other upstream 2797155 22114382 ~ 22120611 (-)
smpx smpx other upstream 2885540 22202767 ~ 22218381 (-)

Expression


Co-expression Network