trnal-cag_6



Basic Information


Item Value
gene id trnal-cag_6
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 1573151 ~ 1573233 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>unassigned_transcript_1218
GTCAGGATGGCCGAGCGGTCCAAGGCGCTGCGTTCAGGTCGCAGTCTCCACTGGAGgcgtgggttcgaatcccactTCTGACA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1218 True 83 tRNA 0.63 1 1573151 1573233

Neighbor


gene id symbol gene type direction distance location
trnaq-cug_17 NA coding upstream 927 1572153 ~ 1572224 (+)
trnal-cag_5 NA coding upstream 1406 1571663 ~ 1571745 (+)
trnaq-uug_4 NA coding upstream 3697 1569387 ~ 1569454 (+)
LOC120551998 NA coding upstream 43842 1523394 ~ 1529309 (+)
LOC120552693 NA coding upstream 1118616 453375 ~ 454535 (+)
trnaq-cug_18 NA coding downstream 409 1573642 ~ 1573713 (+)
trnal-cag_7 NA coding downstream 1402 1574635 ~ 1574717 (+)
trnaq-cug_19 NA coding downstream 1894 1575127 ~ 1575198 (+)
trnaq-cug_20 NA coding downstream 3380 1576613 ~ 1576684 (+)
trnaq-cug_21 NA coding downstream 4875 1578108 ~ 1578179 (+)
G217352 ift74 non-coding upstream 51614 1517494 ~ 1521537 (+)
G217326 NA non-coding upstream 219567 1352160 ~ 1353584 (+)
G217268 NA non-coding upstream 224327 886018 ~ 1348824 (+)
LOC120551977 NA non-coding upstream 718279 852609 ~ 854872 (+)
G217250 NA non-coding upstream 857831 715121 ~ 715320 (+)
G217378 NA non-coding downstream 79944 1653177 ~ 1731066 (+)
G217384 NA non-coding downstream 177240 1750473 ~ 1835068 (+)
G217389 NA non-coding downstream 230586 1803819 ~ 1830678 (+)
LOC120552171 NA non-coding downstream 495070 2068303 ~ 2069213 (+)
G217444 NA non-coding downstream 634018 2207251 ~ 2207564 (+)
zcchc2 zcchc2 other upstream 67936 1462750 ~ 1505215 (+)
G217377 NA other downstream 95929 1669162 ~ 1675400 (+)
G217606 svil other downstream 1433050 3006283 ~ 3021642 (+)
LOC120552392 mtpap other downstream 1647382 3220615 ~ 3233822 (+)
G217723 cnn3 other downstream 1922217 3495450 ~ 3543785 (+)
chchd7 chchd7,LOC102799933 other downstream 2097187 3670420 ~ 3704375 (+)

Expression



Co-expression Network