trnag-ucc_36


Basic Information

Item Value
gene id trnag-ucc_36
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 3181298 ~ 3181369 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_1286
GCGATGGTGGTATAGTGGTGAGCATAGCTGCCTTCCAAGCAGTTgacccgggttcgattcccggcCATCGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1286 True 72 tRNA 0.58 1 3181298 3181369

Neighbor

gene id symbol gene type direction distance location
znf438 znf438,LOC104952784 coding upstream 245729 2878512 ~ 2935569 (+)
arhgap12b arhgap12 coding upstream 408612 2679636 ~ 2772686 (+)
LOC120552716 kif5b coding upstream 508560 2624686 ~ 2672738 (+)
gfod1 gfod1,LOC100711398,LOC102233768,LOC102788772 coding upstream 565397 2567665 ~ 2615901 (+)
slc12a7b LOC103361595 coding upstream 622672 2458659 ~ 2558626 (+)
jcada kiaa1462 coding downstream 101226 3282595 ~ 3306837 (+)
abcd3a abcd3 coding downstream 220599 3401968 ~ 3433621 (+)
steap2 steap2 coding downstream 388903 3570272 ~ 3638033 (+)
arhgef4 arhgef4 coding downstream 532942 3714311 ~ 3873302 (+)
LOC120552545 NA coding downstream 719582 3900951 ~ 3935126 (+)
trnas-aga_13 NA non-coding upstream 12132 3169085 ~ 3169166 (+)
trnag-ucc_35 NA non-coding upstream 12440 3168787 ~ 3168858 (+)
trnas-aga_12 NA non-coding upstream 13474 3167743 ~ 3167824 (+)
LOC120552406 NA non-coding upstream 18222 3155185 ~ 3163076 (+)
G217618 NA non-coding upstream 133873 3045392 ~ 3047425 (+)
trnas-aga_14 NA non-coding downstream 235 3181604 ~ 3181685 (+)
trnag-ucc_37 NA non-coding downstream 4416 3185785 ~ 3185856 (+)
trnaa-ugc_22 NA non-coding downstream 4740 3186109 ~ 3186180 (+)
trnag-ucc_38 NA non-coding downstream 10216 3191585 ~ 3191656 (+)
trnas-aga_15 NA non-coding downstream 10523 3191892 ~ 3191973 (+)
G217606 svil other upstream 159656 3006283 ~ 3021642 (+)
G217377 NA other upstream 1505898 1669162 ~ 1675400 (+)
zcchc2 zcchc2 other upstream 1676083 1462750 ~ 1505215 (+)
LOC120552392 mtpap other downstream 39246 3220615 ~ 3233822 (+)
G217723 cnn3 other downstream 314081 3495450 ~ 3543785 (+)
chchd7 chchd7,LOC102799933 other downstream 489051 3670420 ~ 3704375 (+)
ppp1r17 NA other downstream 1074679 4256048 ~ 4261598 (+)
trdmt1 LOC104946219,LOC101070638 other downstream 1330344 4511713 ~ 4522706 (+)

Expression


Co-expression Network