trnas-gcu_20


Basic Information

Item Value
gene id trnas-gcu_20
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 4063994 ~ 4064075 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_1352
AACGaggtggccgagtggttaaggcgatggactGCTAATCCATTGTGCTCTGCACGCGTGGGTTTGAATCCCATCCTCGTCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1352 True 82 tRNA 0.56 1 4063994 4064075

Neighbor

gene id symbol gene type direction distance location
LOC120552545 NA coding upstream 128868 3900951 ~ 3935126 (+)
arhgef4 arhgef4 coding upstream 190692 3714311 ~ 3873302 (+)
steap2 steap2 coding upstream 425961 3570272 ~ 3638033 (+)
abcd3a abcd3 coding upstream 630373 3401968 ~ 3433621 (+)
jcada kiaa1462 coding upstream 757157 3282595 ~ 3306837 (+)
LOC120552069 NA coding downstream 157834 4221909 ~ 4250306 (+)
LOC120552080 LOC107732049,LOC100535932 coding downstream 249276 4313351 ~ 4323124 (+)
trnaa-cgc_15 NA coding downstream 329429 4393504 ~ 4393576 (+)
trnas-gcu_24 NA coding downstream 346805 4410880 ~ 4410962 (+)
trnas-gcu_25 NA coding downstream 348475 4412550 ~ 4412631 (+)
G217795 NA non-coding upstream 122669 3940796 ~ 3941325 (+)
G217788 NA non-coding upstream 236936 3826556 ~ 3827058 (+)
LOC120552544 NA non-coding upstream 355275 3705024 ~ 3708719 (+)
G217769 NA non-coding upstream 397501 3664861 ~ 3666493 (+)
G217768 NA non-coding upstream 399231 3664357 ~ 3664763 (+)
G217925 NA non-coding downstream 338974 4403049 ~ 4403369 (+)
G217927 NA non-coding downstream 372348 4436423 ~ 4436735 (+)
G217956 NA non-coding downstream 459519 4523594 ~ 4523896 (+)
G217969 NA non-coding downstream 591190 4655265 ~ 4655474 (+)
G217964 NA non-coding downstream 695545 4759620 ~ 4762250 (+)
chchd7 chchd7,LOC102799933 other upstream 359619 3670420 ~ 3704375 (+)
G217723 cnn3 other upstream 520209 3495450 ~ 3543785 (+)
LOC120552392 mtpap other upstream 830172 3220615 ~ 3233822 (+)
G217606 svil other upstream 1042352 3006283 ~ 3021642 (+)
G217377 NA other upstream 2388594 1669162 ~ 1675400 (+)
ppp1r17 NA other downstream 191973 4256048 ~ 4261598 (+)
trdmt1 LOC104946219,LOC101070638 other downstream 447638 4511713 ~ 4522706 (+)
LOC120552660 NA other downstream 3296531 7360606 ~ 7373347 (+)
LOC120552265 LOC101478037,LOC102216221,LOC100695799 other downstream 4459224 8523299 ~ 8596356 (+)
G218441 LOC101478037,LOC102216221,LOC100695799 other downstream 4486708 8550783 ~ 8606578 (+)

Expression


Co-expression Network