trnaa-cgc_15


Basic Information

Item Value
gene id trnaa-cgc_15
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 4393504 ~ 4393576 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_1353
GGGGAATTAGCTCAAGTGGTAGAGCGCTTGCTTCGCATGCGAGAGGTAGCGGGATCGATGCCCGCATTCTCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1353 True 73 tRNA 0.58 1 4393504 4393576

Neighbor

gene id symbol gene type direction distance location
LOC120552080 LOC107732049,LOC100535932 coding upstream 70380 4313351 ~ 4323124 (+)
LOC120552069 NA coding upstream 143198 4221909 ~ 4250306 (+)
trnas-gcu_20 NA coding upstream 329429 4063994 ~ 4064075 (+)
LOC120552545 NA coding upstream 458378 3900951 ~ 3935126 (+)
arhgef4 arhgef4 coding upstream 520202 3714311 ~ 3873302 (+)
trnas-gcu_24 NA coding downstream 17304 4410880 ~ 4410962 (+)
trnas-gcu_25 NA coding downstream 18974 4412550 ~ 4412631 (+)
trnas-gcu_26 NA coding downstream 21346 4414922 ~ 4415003 (+)
trnas-gcu_27 NA coding downstream 25516 4419092 ~ 4419173 (+)
plppr5b plppr5,LOC102778366 coding downstream 225063 4618639 ~ 4756817 (+)
G217795 NA non-coding upstream 452179 3940796 ~ 3941325 (+)
G217788 NA non-coding upstream 566446 3826556 ~ 3827058 (+)
LOC120552544 NA non-coding upstream 684785 3705024 ~ 3708719 (+)
G217769 NA non-coding upstream 727011 3664861 ~ 3666493 (+)
G217768 NA non-coding upstream 728741 3664357 ~ 3664763 (+)
G217925 NA non-coding downstream 9473 4403049 ~ 4403369 (+)
G217927 NA non-coding downstream 42847 4436423 ~ 4436735 (+)
G217956 NA non-coding downstream 130018 4523594 ~ 4523896 (+)
G217969 NA non-coding downstream 261689 4655265 ~ 4655474 (+)
G217964 NA non-coding downstream 366044 4759620 ~ 4762250 (+)
ppp1r17 NA other upstream 131906 4256048 ~ 4261598 (+)
chchd7 chchd7,LOC102799933 other upstream 689129 3670420 ~ 3704375 (+)
G217723 cnn3 other upstream 849719 3495450 ~ 3543785 (+)
LOC120552392 mtpap other upstream 1159682 3220615 ~ 3233822 (+)
G217606 svil other upstream 1371862 3006283 ~ 3021642 (+)
trdmt1 LOC104946219,LOC101070638 other downstream 118137 4511713 ~ 4522706 (+)
LOC120552660 NA other downstream 2967030 7360606 ~ 7373347 (+)
LOC120552265 LOC101478037,LOC102216221,LOC100695799 other downstream 4129723 8523299 ~ 8596356 (+)
G218441 LOC101478037,LOC102216221,LOC100695799 other downstream 4157207 8550783 ~ 8606578 (+)
G218445 NA other downstream 4162640 8556216 ~ 8557253 (+)

Expression


Co-expression Network