trnas-gcu_22



Basic Information


Item Value
gene id trnas-gcu_22
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 4404471 ~ 4404552 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>unassigned_transcript_1355
GACGaggtggccgagtggttaaggcgatggactGCTAATCCATTGTGCTTTGCACGCGTGGGTTAGAATCCCATCCTCGTTG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1355 True 82 tRNA 0.55 1 4404471 4404552

Neighbor


gene id symbol gene type direction distance location
trnas-gcu_21 NA coding downstream 10101 4394289 ~ 4394370 (-)
dtx3l1 LOC104939629 coding downstream 35127 4362355 ~ 4369344 (-)
pde1ca pde1c,LOC105910890 coding downstream 97594 4278321 ~ 4306877 (-)
neurod6a LOC107736131 coding downstream 207002 4193845 ~ 4197469 (-)
LOC120552076 NA coding downstream 227928 4166077 ~ 4176543 (-)
trnas-gcu_23 NA coding upstream 1590 4406142 ~ 4406223 (-)
trnas-gcu_28 NA coding upstream 17521 4422073 ~ 4422154 (-)
trnas-gcu_29 NA coding upstream 20067 4424619 ~ 4424700 (-)
trnas-gcu_30 NA coding upstream 21747 4426299 ~ 4426380 (-)
c1ql3a c1ql3,LOC102786996 coding upstream 29080 4433632 ~ 4455529 (-)
G217905 NA non-coding downstream 141539 4262626 ~ 4262932 (-)
G217884 NA non-coding downstream 225553 4178696 ~ 4178918 (-)
G217828 NA non-coding downstream 499919 3904107 ~ 3904552 (-)
G217818 NA non-coding downstream 530837 3871733 ~ 3873634 (-)
G217817 NA non-coding downstream 559989 3844143 ~ 3844482 (-)
G217935 NA non-coding upstream 61431 4465983 ~ 4466440 (-)
G217960 NA non-coding upstream 161078 4565630 ~ 4566156 (-)
G217971 NA non-coding upstream 214064 4618616 ~ 4618865 (-)
G217976 NA non-coding upstream 355713 4760265 ~ 4762269 (-)
G217977 NA non-coding upstream 381841 4786393 ~ 4786618 (-)
G217837 NA other downstream 463142 3936010 ~ 3941329 (-)
G217780 chchd7,LOC102799933 other downstream 700114 3692952 ~ 3704357 (-)
f3a NA other downstream 948427 3437802 ~ 3456044 (-)
LOC120552696 NA other downstream 1060766 3315418 ~ 3343705 (-)
svila svil other downstream 1268257 2988926 ~ 3136214 (-)
G218019 NA other upstream 622953 5027505 ~ 5036704 (-)
G218085 LOC107687935 other upstream 1295677 5700229 ~ 5700576 (-)
G218453 adarb2 other upstream 3790377 8194929 ~ 8195879 (-)
G218471 NA other upstream 4025912 8430464 ~ 8430930 (-)
prkdc prkdc other upstream 4393229 8797781 ~ 8851726 (-)

Expression



Co-expression Network