trnas-gcu_25


Basic Information

Item Value
gene id trnas-gcu_25
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 4412550 ~ 4412631 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_1358
GACGAGGTGGCCGAGTGTTTAAGGCGATGGACTGCTAATCCATTGTGCTTTGCACgcgtgggttcgaatcccatcCTCGTCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1358 True 82 tRNA 0.56 1 4412550 4412631

Neighbor

gene id symbol gene type direction distance location
trnas-gcu_24 NA coding upstream 1588 4410880 ~ 4410962 (+)
trnaa-cgc_15 NA coding upstream 18974 4393504 ~ 4393576 (+)
LOC120552080 LOC107732049,LOC100535932 coding upstream 89426 4313351 ~ 4323124 (+)
LOC120552069 NA coding upstream 162244 4221909 ~ 4250306 (+)
trnas-gcu_20 NA coding upstream 348475 4063994 ~ 4064075 (+)
trnas-gcu_26 NA coding downstream 2291 4414922 ~ 4415003 (+)
trnas-gcu_27 NA coding downstream 6461 4419092 ~ 4419173 (+)
plppr5b plppr5,LOC102778366 coding downstream 206008 4618639 ~ 4756817 (+)
trnaa-agc_24 NA coding downstream 386544 4799175 ~ 4799247 (+)
trnaa-agc_25 NA coding downstream 392600 4805231 ~ 4805303 (+)
G217925 NA non-coding upstream 9181 4403049 ~ 4403369 (+)
G217795 NA non-coding upstream 471225 3940796 ~ 3941325 (+)
G217788 NA non-coding upstream 585492 3826556 ~ 3827058 (+)
LOC120552544 NA non-coding upstream 703831 3705024 ~ 3708719 (+)
G217769 NA non-coding upstream 746057 3664861 ~ 3666493 (+)
G217927 NA non-coding downstream 23792 4436423 ~ 4436735 (+)
G217956 NA non-coding downstream 110963 4523594 ~ 4523896 (+)
G217969 NA non-coding downstream 242634 4655265 ~ 4655474 (+)
G217964 NA non-coding downstream 346989 4759620 ~ 4762250 (+)
G218012 NA non-coding downstream 543442 4956073 ~ 4956401 (+)
ppp1r17 NA other upstream 150952 4256048 ~ 4261598 (+)
chchd7 chchd7,LOC102799933 other upstream 708175 3670420 ~ 3704375 (+)
G217723 cnn3 other upstream 868765 3495450 ~ 3543785 (+)
LOC120552392 mtpap other upstream 1178728 3220615 ~ 3233822 (+)
G217606 svil other upstream 1390908 3006283 ~ 3021642 (+)
trdmt1 LOC104946219,LOC101070638 other downstream 99082 4511713 ~ 4522706 (+)
LOC120552660 NA other downstream 2947975 7360606 ~ 7373347 (+)
LOC120552265 LOC101478037,LOC102216221,LOC100695799 other downstream 4110668 8523299 ~ 8596356 (+)
G218441 LOC101478037,LOC102216221,LOC100695799 other downstream 4138152 8550783 ~ 8606578 (+)
G218445 NA other downstream 4143585 8556216 ~ 8557253 (+)

Expression


Co-expression Network