trnas-gcu_30



Basic Information


Item Value
gene id trnas-gcu_30
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 4426299 ~ 4426380 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>unassigned_transcript_1363
GACGaggtggccgagtggttaaggcgttGGACTGCTAATCCATTGTGCTTTGCATGCGTGGGTTAGAATCCCATCCTTGTCG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1363 True 82 tRNA 0.54 1 4426299 4426380

Neighbor


gene id symbol gene type direction distance location
trnas-gcu_29 NA coding downstream 1599 4424619 ~ 4424700 (-)
trnas-gcu_28 NA coding downstream 4145 4422073 ~ 4422154 (-)
trnas-gcu_23 NA coding downstream 20076 4406142 ~ 4406223 (-)
trnas-gcu_22 NA coding downstream 21747 4404471 ~ 4404552 (-)
trnas-gcu_21 NA coding downstream 31929 4394289 ~ 4394370 (-)
c1ql3a c1ql3,LOC102786996 coding upstream 7252 4433632 ~ 4455529 (-)
rsu1 rsu1,LOC102787280 coding upstream 40471 4466851 ~ 4510609 (-)
LOC120552074 NA coding upstream 98921 4525301 ~ 4532240 (-)
LOC120552070 plppr4,LOC102778844 coding upstream 144037 4570417 ~ 4613727 (-)
trnas-gcu_31 NA coding upstream 371101 4797481 ~ 4797562 (-)
G217905 NA non-coding downstream 163367 4262626 ~ 4262932 (-)
G217884 NA non-coding downstream 247381 4178696 ~ 4178918 (-)
G217828 NA non-coding downstream 521747 3904107 ~ 3904552 (-)
G217818 NA non-coding downstream 552665 3871733 ~ 3873634 (-)
G217817 NA non-coding downstream 581817 3844143 ~ 3844482 (-)
G217935 NA non-coding upstream 39603 4465983 ~ 4466440 (-)
G217960 NA non-coding upstream 139250 4565630 ~ 4566156 (-)
G217971 NA non-coding upstream 192236 4618616 ~ 4618865 (-)
G217976 NA non-coding upstream 333885 4760265 ~ 4762269 (-)
G217977 NA non-coding upstream 360013 4786393 ~ 4786618 (-)
G217837 NA other downstream 484970 3936010 ~ 3941329 (-)
G217780 chchd7,LOC102799933 other downstream 721942 3692952 ~ 3704357 (-)
f3a NA other downstream 970255 3437802 ~ 3456044 (-)
LOC120552696 NA other downstream 1082594 3315418 ~ 3343705 (-)
svila svil other downstream 1290085 2988926 ~ 3136214 (-)
G218019 NA other upstream 601125 5027505 ~ 5036704 (-)
G218085 LOC107687935 other upstream 1273849 5700229 ~ 5700576 (-)
G218453 adarb2 other upstream 3768549 8194929 ~ 8195879 (-)
G218471 NA other upstream 4004084 8430464 ~ 8430930 (-)
prkdc prkdc other upstream 4371401 8797781 ~ 8851726 (-)

Expression



Co-expression Network