trnas-gcu_42


Basic Information

Item Value
gene id trnas-gcu_42
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 4828670 ~ 4828751 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_1379
GACGaggtggccgagtggttaaggcgatggactGCTAATCCATTGTGCTTTGTACGCCGTGGTTCGAATCCTATCCTCGTCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1379 True 82 tRNA 0.55 1 4828670 4828751

Neighbor

gene id symbol gene type direction distance location
trnas-gcu_41 NA coding upstream 684 4827905 ~ 4827986 (+)
trnas-gcu_40 NA coding upstream 3131 4825457 ~ 4825539 (+)
trnas-gcu_39 NA coding upstream 4908 4823681 ~ 4823762 (+)
trnas-gcu_38 NA coding upstream 14343 4814245 ~ 4814327 (+)
trnas-gcu_37 NA coding upstream 16038 4812551 ~ 4812632 (+)
trnas-gcu_43 NA coding downstream 7361 4836112 ~ 4836193 (+)
trnas-gcu_44 NA coding downstream 12636 4841387 ~ 4841468 (+)
trnas-gcu_45 NA coding downstream 13880 4842631 ~ 4842710 (+)
trnas-gcu_46 NA coding downstream 15281 4844032 ~ 4844117 (+)
trnas-gcu_47 NA coding downstream 21762 4850513 ~ 4850596 (+)
G217964 NA non-coding upstream 66420 4759620 ~ 4762250 (+)
G217969 NA non-coding upstream 173196 4655265 ~ 4655474 (+)
G217956 NA non-coding upstream 304774 4523594 ~ 4523896 (+)
G217927 NA non-coding upstream 391935 4436423 ~ 4436735 (+)
G217925 NA non-coding upstream 425301 4403049 ~ 4403369 (+)
G218012 NA non-coding downstream 127322 4956073 ~ 4956401 (+)
G218023 NA non-coding downstream 373836 5202587 ~ 5202896 (+)
G218025 NA non-coding downstream 405039 5233790 ~ 5234090 (+)
G218026 NA non-coding downstream 418544 5247295 ~ 5247686 (+)
G218031 NA non-coding downstream 593223 5421974 ~ 5422348 (+)
trdmt1 LOC104946219,LOC101070638 other upstream 305964 4511713 ~ 4522706 (+)
ppp1r17 NA other upstream 567072 4256048 ~ 4261598 (+)
chchd7 chchd7,LOC102799933 other upstream 1124295 3670420 ~ 3704375 (+)
G217723 cnn3 other upstream 1284885 3495450 ~ 3543785 (+)
LOC120552392 mtpap other upstream 1594848 3220615 ~ 3233822 (+)
LOC120552660 NA other downstream 2531855 7360606 ~ 7373347 (+)
LOC120552265 LOC101478037,LOC102216221,LOC100695799 other downstream 3694548 8523299 ~ 8596356 (+)
G218441 LOC101478037,LOC102216221,LOC100695799 other downstream 3722032 8550783 ~ 8606578 (+)
G218445 NA other downstream 3727465 8556216 ~ 8557253 (+)
rnpc3 NA other downstream 4383167 9211918 ~ 9230163 (+)

Expression


Co-expression Network