trnas-gcu_46


Basic Information

Item Value
gene id trnas-gcu_46
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 4844032 ~ 4844117 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_1384
GACGAGGTGGCCCGAGTGGTTTAAAGCGATGGACTGCTAATCCATTGTGCTTTTTGCACgcgtgggttcgaatcccatcCTCGTCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1384 True 86 tRNA 0.55 1 4844032 4844117

Neighbor

gene id symbol gene type direction distance location
trnas-gcu_45 NA coding upstream 1322 4842631 ~ 4842710 (+)
trnas-gcu_44 NA coding upstream 2564 4841387 ~ 4841468 (+)
trnas-gcu_43 NA coding upstream 7839 4836112 ~ 4836193 (+)
trnas-gcu_42 NA coding upstream 15281 4828670 ~ 4828751 (+)
trnas-gcu_41 NA coding upstream 16046 4827905 ~ 4827986 (+)
trnas-gcu_47 NA coding downstream 6396 4850513 ~ 4850596 (+)
trnas-gcu_48 NA coding downstream 7207 4851324 ~ 4851410 (+)
trnas-acu_1 NA coding downstream 13910 4858027 ~ 4858112 (+)
LOC120551947 NA coding downstream 37171 4881288 ~ 4888711 (+)
LOC120552695 NA coding downstream 691530 5535647 ~ 5555611 (+)
G217964 NA non-coding upstream 81782 4759620 ~ 4762250 (+)
G217969 NA non-coding upstream 188558 4655265 ~ 4655474 (+)
G217956 NA non-coding upstream 320136 4523594 ~ 4523896 (+)
G217927 NA non-coding upstream 407297 4436423 ~ 4436735 (+)
G217925 NA non-coding upstream 440663 4403049 ~ 4403369 (+)
G218012 NA non-coding downstream 111956 4956073 ~ 4956401 (+)
G218023 NA non-coding downstream 358470 5202587 ~ 5202896 (+)
G218025 NA non-coding downstream 389673 5233790 ~ 5234090 (+)
G218026 NA non-coding downstream 403178 5247295 ~ 5247686 (+)
G218031 NA non-coding downstream 577857 5421974 ~ 5422348 (+)
trdmt1 LOC104946219,LOC101070638 other upstream 321326 4511713 ~ 4522706 (+)
ppp1r17 NA other upstream 582434 4256048 ~ 4261598 (+)
chchd7 chchd7,LOC102799933 other upstream 1139657 3670420 ~ 3704375 (+)
G217723 cnn3 other upstream 1300247 3495450 ~ 3543785 (+)
LOC120552392 mtpap other upstream 1610210 3220615 ~ 3233822 (+)
LOC120552660 NA other downstream 2516489 7360606 ~ 7373347 (+)
LOC120552265 LOC101478037,LOC102216221,LOC100695799 other downstream 3679182 8523299 ~ 8596356 (+)
G218441 LOC101478037,LOC102216221,LOC100695799 other downstream 3706666 8550783 ~ 8606578 (+)
G218445 NA other downstream 3712099 8556216 ~ 8557253 (+)
rnpc3 NA other downstream 4367801 9211918 ~ 9230163 (+)

Expression


Co-expression Network