trnas-gcu_48


Basic Information

Item Value
gene id trnas-gcu_48
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 4851324 ~ 4851410 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_1387
GACGAGGTTGCCGAGTGGTTAAGGGGATGGACTGCTAATCCATTTGCTGCTTTTGCGCACgcgtgggttcgaatcccatcCTCGTCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1387 True 87 tRNA 0.56 1 4851324 4851410

Neighbor

gene id symbol gene type direction distance location
trnas-gcu_47 NA coding upstream 728 4850513 ~ 4850596 (+)
trnas-gcu_46 NA coding upstream 7207 4844032 ~ 4844117 (+)
trnas-gcu_45 NA coding upstream 8614 4842631 ~ 4842710 (+)
trnas-gcu_44 NA coding upstream 9856 4841387 ~ 4841468 (+)
trnas-gcu_43 NA coding upstream 15131 4836112 ~ 4836193 (+)
trnas-acu_1 NA coding downstream 6617 4858027 ~ 4858112 (+)
LOC120551947 NA coding downstream 29878 4881288 ~ 4888711 (+)
LOC120552695 NA coding downstream 684237 5535647 ~ 5555611 (+)
trnas-gcu_52 NA coding downstream 718595 5570005 ~ 5570086 (+)
trnas-gcu_53 NA coding downstream 720642 5572052 ~ 5572133 (+)
G217964 NA non-coding upstream 89074 4759620 ~ 4762250 (+)
G217969 NA non-coding upstream 195850 4655265 ~ 4655474 (+)
G217956 NA non-coding upstream 327428 4523594 ~ 4523896 (+)
G217927 NA non-coding upstream 414589 4436423 ~ 4436735 (+)
G217925 NA non-coding upstream 447955 4403049 ~ 4403369 (+)
G218012 NA non-coding downstream 104663 4956073 ~ 4956401 (+)
G218023 NA non-coding downstream 351177 5202587 ~ 5202896 (+)
G218025 NA non-coding downstream 382380 5233790 ~ 5234090 (+)
G218026 NA non-coding downstream 395885 5247295 ~ 5247686 (+)
G218031 NA non-coding downstream 570564 5421974 ~ 5422348 (+)
trdmt1 LOC104946219,LOC101070638 other upstream 328618 4511713 ~ 4522706 (+)
ppp1r17 NA other upstream 589726 4256048 ~ 4261598 (+)
chchd7 chchd7,LOC102799933 other upstream 1146949 3670420 ~ 3704375 (+)
G217723 cnn3 other upstream 1307539 3495450 ~ 3543785 (+)
LOC120552392 mtpap other upstream 1617502 3220615 ~ 3233822 (+)
LOC120552660 NA other downstream 2509196 7360606 ~ 7373347 (+)
LOC120552265 LOC101478037,LOC102216221,LOC100695799 other downstream 3671889 8523299 ~ 8596356 (+)
G218441 LOC101478037,LOC102216221,LOC100695799 other downstream 3699373 8550783 ~ 8606578 (+)
G218445 NA other downstream 3704806 8556216 ~ 8557253 (+)
rnpc3 NA other downstream 4360508 9211918 ~ 9230163 (+)

Expression


Co-expression Network