trnas-gcu_57


Basic Information

Item Value
gene id trnas-gcu_57
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 5579915 ~ 5579996 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_1397
GACGaggtggccgagtggttaaggcgatggactGCTAATCCATTGTGCTCTGCACGcatgggttcaaatcccatccTCGTCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1397 True 82 tRNA 0.56 1 5579915 5579996

Neighbor

gene id symbol gene type direction distance location
trnas-gcu_56 NA coding upstream 1223 5578610 ~ 5578692 (+)
trnas-gcu_55 NA coding upstream 3713 5576121 ~ 5576202 (+)
trnas-gcu_54 NA coding upstream 6772 5573062 ~ 5573143 (+)
trnas-gcu_53 NA coding upstream 7782 5572052 ~ 5572133 (+)
trnas-gcu_52 NA coding upstream 9829 5570005 ~ 5570086 (+)
trnas-gcu_58 NA coding downstream 1050 5581046 ~ 5581127 (+)
trnas-gcu_59 NA coding downstream 2637 5582633 ~ 5582714 (+)
trnas-gcu_60 NA coding downstream 3764 5583760 ~ 5583841 (+)
trnas-gcu_61 NA coding downstream 5128 5585124 ~ 5585203 (+)
trnas-gcu_62 NA coding downstream 5900 5585896 ~ 5585977 (+)
G218039 NA non-coding upstream 88547 5491143 ~ 5491368 (+)
G218031 NA non-coding upstream 157567 5421974 ~ 5422348 (+)
G218026 NA non-coding upstream 332229 5247295 ~ 5247686 (+)
G218025 NA non-coding upstream 345825 5233790 ~ 5234090 (+)
G218023 NA non-coding upstream 377019 5202587 ~ 5202896 (+)
G218060 NA non-coding downstream 49715 5629711 ~ 5630218 (+)
G218067 LOC107382602,LOC104967228 non-coding downstream 142812 5722808 ~ 5757421 (+)
G218083 NA non-coding downstream 373113 5953109 ~ 5954354 (+)
G218141 NA non-coding downstream 505068 6085064 ~ 6085649 (+)
G218150 NA non-coding downstream 648779 6228775 ~ 6228976 (+)
trdmt1 LOC104946219,LOC101070638 other upstream 1057209 4511713 ~ 4522706 (+)
ppp1r17 NA other upstream 1318317 4256048 ~ 4261598 (+)
chchd7 chchd7,LOC102799933 other upstream 1875540 3670420 ~ 3704375 (+)
G217723 cnn3 other upstream 2036130 3495450 ~ 3543785 (+)
LOC120552392 mtpap other upstream 2346093 3220615 ~ 3233822 (+)
LOC120552660 NA other downstream 1780610 7360606 ~ 7373347 (+)
LOC120552265 LOC101478037,LOC102216221,LOC100695799 other downstream 2943303 8523299 ~ 8596356 (+)
G218441 LOC101478037,LOC102216221,LOC100695799 other downstream 2970787 8550783 ~ 8606578 (+)
G218445 NA other downstream 2976220 8556216 ~ 8557253 (+)
rnpc3 NA other downstream 3631922 9211918 ~ 9230163 (+)

Expression


Co-expression Network