trnas-gcu_58


Basic Information

Item Value
gene id trnas-gcu_58
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 5581046 ~ 5581127 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_1398
GACGaggtggccgagtggttaaggcgatggactGCTAATCCATTGTGCTCTGCACGcatgggttcaaatcccatccTCGTCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1398 True 82 tRNA 0.56 1 5581046 5581127

Neighbor

gene id symbol gene type direction distance location
trnas-gcu_57 NA coding upstream 1050 5579915 ~ 5579996 (+)
trnas-gcu_56 NA coding upstream 2354 5578610 ~ 5578692 (+)
trnas-gcu_55 NA coding upstream 4844 5576121 ~ 5576202 (+)
trnas-gcu_54 NA coding upstream 7903 5573062 ~ 5573143 (+)
trnas-gcu_53 NA coding upstream 8913 5572052 ~ 5572133 (+)
trnas-gcu_59 NA coding downstream 1506 5582633 ~ 5582714 (+)
trnas-gcu_60 NA coding downstream 2633 5583760 ~ 5583841 (+)
trnas-gcu_61 NA coding downstream 3997 5585124 ~ 5585203 (+)
trnas-gcu_62 NA coding downstream 4769 5585896 ~ 5585977 (+)
trnas-gcu_63 NA coding downstream 6129 5587256 ~ 5587338 (+)
G218039 NA non-coding upstream 89678 5491143 ~ 5491368 (+)
G218031 NA non-coding upstream 158698 5421974 ~ 5422348 (+)
G218026 NA non-coding upstream 333360 5247295 ~ 5247686 (+)
G218025 NA non-coding upstream 346956 5233790 ~ 5234090 (+)
G218023 NA non-coding upstream 378150 5202587 ~ 5202896 (+)
G218060 NA non-coding downstream 48584 5629711 ~ 5630218 (+)
G218067 LOC107382602,LOC104967228 non-coding downstream 141681 5722808 ~ 5757421 (+)
G218083 NA non-coding downstream 371982 5953109 ~ 5954354 (+)
G218141 NA non-coding downstream 503937 6085064 ~ 6085649 (+)
G218150 NA non-coding downstream 647648 6228775 ~ 6228976 (+)
trdmt1 LOC104946219,LOC101070638 other upstream 1058340 4511713 ~ 4522706 (+)
ppp1r17 NA other upstream 1319448 4256048 ~ 4261598 (+)
chchd7 chchd7,LOC102799933 other upstream 1876671 3670420 ~ 3704375 (+)
G217723 cnn3 other upstream 2037261 3495450 ~ 3543785 (+)
LOC120552392 mtpap other upstream 2347224 3220615 ~ 3233822 (+)
LOC120552660 NA other downstream 1779479 7360606 ~ 7373347 (+)
LOC120552265 LOC101478037,LOC102216221,LOC100695799 other downstream 2942172 8523299 ~ 8596356 (+)
G218441 LOC101478037,LOC102216221,LOC100695799 other downstream 2969656 8550783 ~ 8606578 (+)
G218445 NA other downstream 2975089 8556216 ~ 8557253 (+)
rnpc3 NA other downstream 3630791 9211918 ~ 9230163 (+)

Expression


Co-expression Network