trnas-gcu_66


Basic Information

Item Value
gene id trnas-gcu_66
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 5591002 ~ 5591083 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_1406
GAAGaggtggccgagtggttaaggcgatggactGCTAATCCATTGTGCTCTGCACGcatgggttcaaatcccatccTCGTCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1406 True 82 tRNA 0.55 1 5591002 5591083

Neighbor

gene id symbol gene type direction distance location
trnas-gcu_65 NA coding upstream 1111 5589807 ~ 5589891 (+)
trnas-gcu_64 NA coding upstream 2474 5588447 ~ 5588528 (+)
trnas-gcu_63 NA coding upstream 3664 5587256 ~ 5587338 (+)
trnas-gcu_62 NA coding upstream 5025 5585896 ~ 5585977 (+)
trnas-gcu_61 NA coding upstream 5799 5585124 ~ 5585203 (+)
reck reck coding downstream 159798 5750881 ~ 5817627 (+)
tgfbr1b tgfbr1,LOC103376883,LOC102779975,LOC108248259 coding downstream 263557 5854640 ~ 5895766 (+)
lancl2 lancl2 coding downstream 318794 5909877 ~ 5928609 (+)
vopp1 vopp1 coding downstream 342937 5934020 ~ 5948852 (+)
mpp7a mpp7,LOC106534949 coding downstream 689519 6280602 ~ 6454013 (+)
G218039 NA non-coding upstream 99634 5491143 ~ 5491368 (+)
G218031 NA non-coding upstream 168654 5421974 ~ 5422348 (+)
G218026 NA non-coding upstream 343316 5247295 ~ 5247686 (+)
G218025 NA non-coding upstream 356912 5233790 ~ 5234090 (+)
G218023 NA non-coding upstream 388106 5202587 ~ 5202896 (+)
G218060 NA non-coding downstream 38628 5629711 ~ 5630218 (+)
G218067 LOC107382602,LOC104967228 non-coding downstream 131725 5722808 ~ 5757421 (+)
G218083 NA non-coding downstream 362026 5953109 ~ 5954354 (+)
G218141 NA non-coding downstream 493981 6085064 ~ 6085649 (+)
G218150 NA non-coding downstream 637692 6228775 ~ 6228976 (+)
trdmt1 LOC104946219,LOC101070638 other upstream 1068296 4511713 ~ 4522706 (+)
ppp1r17 NA other upstream 1329404 4256048 ~ 4261598 (+)
chchd7 chchd7,LOC102799933 other upstream 1886627 3670420 ~ 3704375 (+)
G217723 cnn3 other upstream 2047217 3495450 ~ 3543785 (+)
LOC120552392 mtpap other upstream 2357180 3220615 ~ 3233822 (+)
LOC120552660 NA other downstream 1769523 7360606 ~ 7373347 (+)
LOC120552265 LOC101478037,LOC102216221,LOC100695799 other downstream 2932216 8523299 ~ 8596356 (+)
G218441 LOC101478037,LOC102216221,LOC100695799 other downstream 2959700 8550783 ~ 8606578 (+)
G218445 NA other downstream 2965133 8556216 ~ 8557253 (+)
rnpc3 NA other downstream 3620835 9211918 ~ 9230163 (+)

Expression


Co-expression Network