G224799


Basic Information

Item Value
gene id G224799
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 2580720 ~ 2636101 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU304714
cttttttttttcttttTGAGGCCCAAACTGTCGGACTGtcagaaataaaagcatgttaataaactaaacatgtctggcccttgtgtgaagttgagtttgacacccttgCTCTAAATTTTCAGGGACGCCGCTCCCCCCCAGAATCTTCCTTTTGGGGTGGGGCGCGCATATGAAATATTAAttaatttcctgtattcggattacacttttatgcaccaatttactgtggaaatacctttatttacacatgtgaagaagaaaataagagatgacaattcaaaatatatcaaagatataatggaaagtatgttgcacaatttttaagtgggtagatggaaatcctggagctttcttaccGCGCATatctgcgtatcacgtagacttgCTTTTGATAACAACGCAGCGGTTTACTTCTGAAACCGGACAAACTCGTAACGTGAAATCTGTGATCCCGTCAGAGGCACAAACTCGACCTCATGGTCCACAAATGTTGTTTCTGTTTCAATCAAATCAAACATTTCGCAGCATTTTATATTTCTTGAAAAGCGACTGTTTGTAGGTGTACctgcaaagtgtttttttattttattaaatgcaTGGTTTTCATTGAACACTAgccctttcattcattcattcattcattcattcatccagtCACATCCACCCAGGGATGTTGTGTTCTGCCAAGAGTAGTGGAGGTAGTTTCCTTTTTCCGTGTGGAGTCCGTAGACTTTGCTGCTTGTGAGTGTGAATCATCCGTGAAGCTGCCTCCGTCCATCGAGTACCTTTTTACTGACACCGTTCCCCCAAAACAACGCTGCCAAATTGGTCTTGAAAAAGCCAAAAGTTTTCTGACGTTCTCTGTGTATAAGTGGTTTAAGTGTATCACATGTTTAAACCTCATTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU304714 True 907 lncRNA 0.40 2 2580720 2636101

Neighbor

gene id symbol gene type direction distance location
LOC120553041 LOC107101452,LOC103140192 coding upstream 147856 2431129 ~ 2432864 (+)
LOC120553528 LOC104959125 coding upstream 203317 2361808 ~ 2377403 (+)
kiaa0930 kiaa0930,LOC102798964 coding upstream 504788 2034011 ~ 2075932 (+)
rtcb rtcb coding upstream 549217 2014378 ~ 2031503 (+)
xpot xpot,LOC102775766 coding upstream 596495 1953095 ~ 1984225 (+)
LOC120553054 NA coding downstream 3930 2640031 ~ 2640866 (+)
trnae-cuc_30 NA coding downstream 41124 2677225 ~ 2677296 (+)
trnae-cuc_31 NA coding downstream 41362 2677463 ~ 2677534 (+)
LOC120553360 NA coding downstream 44941 2681042 ~ 2682442 (+)
LOC120553363 LOC108414267,LOC102204254,LOC108269716,LOC108261415,LOC103379246,LOC103381127 coding downstream 47691 2683792 ~ 2685115 (+)
G224788 NA non-coding upstream 54817 2445002 ~ 2525903 (+)
G224774 NA non-coding upstream 128256 2435903 ~ 2452464 (+)
G224777 NA non-coding upstream 145544 2433886 ~ 2435176 (+)
G224764 NA non-coding upstream 222732 2262662 ~ 2357988 (+)
G224808 NA non-coding downstream 366 2636467 ~ 2638007 (+)
G225346 NA non-coding downstream 120288 2756389 ~ 2758407 (+)
G225377 NA non-coding downstream 143954 2780055 ~ 2780524 (+)
G225419 NA non-coding downstream 298789 2934890 ~ 2937696 (+)
G225420 NA non-coding downstream 303287 2939388 ~ 2945892 (+)
kcna1b LOC107101449,LOC101167438,LOC104943874,LOC101481979,LOC102202784,LOC103382518 other upstream 86222 2479638 ~ 2494498 (+)
G224728 NA other upstream 283718 2163643 ~ 2297002 (+)
phf21b phf21b,LOC102797984 other upstream 292330 2133689 ~ 2288390 (+)
G224700 NA other upstream 572205 2006584 ~ 2008515 (+)
G224705 rpl18a other upstream 630068 1943566 ~ 1950652 (+)
G224811 LOC106958509,LOC107690788,LOC107671222,LOC107574171,LOC107579420 other downstream 6435 2642536 ~ 2663134 (+)
G225344 NA other downstream 104283 2740384 ~ 2763586 (+)
G225394 NA other downstream 214052 2850153 ~ 2850596 (+)
G225445 NA other downstream 493843 3129944 ~ 3131302 (+)
LOC120553724 lgr5,LOC102312898,LOC102787110 other downstream 540439 3176540 ~ 3246203 (+)

Expression


Co-expression Network