G224808


Basic Information

Item Value
gene id G224808
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 2636467 ~ 2638007 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU304730
atgtagagagacagcagtagagagtagtatgtagagagacagcagtagagagtagtatgtagagagacagcagtagagagtagtatgtagagagacaacagtagagagtagtatgtagagagacagcagtagagagtagtatgtagagagacaacagtagagagtattatgtagagagtcagcagtagagagtagtatgtagagagtcagcagtagagagtagtagtagagagacagcagtagagagtagtatgtagagagacatcagtagagagtagtatgtagagagacagcagtagagagtagtatgtagagagacagcagtagagagtagtatgtagagagacagcagtagagagtagtatgtacagagacagcagtagagagtagtatgtacagagacaacagtagagagtagtatgtagagagacaacagtagagagtagtatgtagagagacatcagtagagagtagtatgta
>TU304731
atgtagagagacagcagtagagagtagtatgtagagagacagcagtagagagtagtatgtagagagacagcagtagagagtagtatagagacagcagtagagagtagtatgtagagagacaacagtagagagtagtatgtagagagacagcagtagagagtagtatgtagagagacaacagtagagagtagtatgtagagagacagcagtagagagtagtatgtagagagacagcagtagagagtagtatgtagagagacaacagtagagagtagtatgtagagagacagcagtagagagtagtatgtagagagacagcagtagagtagtatgtagagagacaacagtagagagtagtatgtagagagacaacagtagagagtagtatgtagagagacagcagtagagagtagtatgtagagagacaacagtagagagtattatgtagagagacagcagtagagagtagtatgtagagagacagcagtagagagtagtatgtagagagacagcagtagagagtagtatgtagagacatcagtagagagtagtatgtagagagacagcagtagagagtagtatgtagagagacagcagtagagagtagtatagagacagcagtagagagtagtatgtagagagacatcagtagagagtagtatgtagagagacaacagtagagagtagtatgtagaga
>TU304732
atgtagagagacagcagtagagagtagtatgtagagagacagcagtagagagtagtatgtagagagacagcagtagagagtagtatagagacagcagtagagagtagtatgtagagagacaacagtagagagtagtatgtagagagacagcagtagagagtagtatgtagagagacaacagtagagagtagtatgtagagagacagcagtagagagtagtatgtagagagacagcagtagagagtagtatgtagagagacaacagtagagagtagtatgtagagagacagcagtagagagtagtatgtagagagacagcagtagagtagtatgtagagagacaacagtagagagtagtatgtagagagacaacagtagagagacagcagtagagagtagtatgtacagagacagcagtagagagtagtatgtacagagacaacagtagagagtagtatgtagagagacaacagtagagagtagtatgtagagagacatcagtagagagtagtatgta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU304730 False 480 lncRNA 0.41 2 2636467 2637392
TU304731 True 697 lncRNA 0.41 4 2636467 2638007
TU304732 False 517 lncRNA 0.41 3 2636467 2637392

Neighbor

gene id symbol gene type direction distance location
LOC120553746 LOC103371429,LOC102796815 coding upstream 7072 2558140 ~ 2629395 (+)
LOC120553041 LOC107101452,LOC103140192 coding upstream 203603 2431129 ~ 2432864 (+)
LOC120553528 LOC104959125 coding upstream 259064 2361808 ~ 2377403 (+)
kiaa0930 kiaa0930,LOC102798964 coding upstream 560535 2034011 ~ 2075932 (+)
rtcb rtcb coding upstream 604964 2014378 ~ 2031503 (+)
LOC120553054 NA coding downstream 2024 2640031 ~ 2640866 (+)
trnae-cuc_30 NA coding downstream 39218 2677225 ~ 2677296 (+)
trnae-cuc_31 NA coding downstream 39456 2677463 ~ 2677534 (+)
LOC120553360 NA coding downstream 43035 2681042 ~ 2682442 (+)
LOC120553363 LOC108414267,LOC102204254,LOC108269716,LOC108261415,LOC103379246,LOC103381127 coding downstream 45785 2683792 ~ 2685115 (+)
G224799 NA non-coding upstream 366 2580720 ~ 2636101 (+)
G224798 NA non-coding upstream 1354 2632570 ~ 2635113 (+)
G224800 NA non-coding upstream 16659 2563609 ~ 2619808 (+)
G224797 NA non-coding upstream 23245 2547530 ~ 2613222 (+)
G224788 NA non-coding upstream 110564 2445002 ~ 2525903 (+)
G225346 NA non-coding downstream 118382 2756389 ~ 2758407 (+)
G225377 NA non-coding downstream 142048 2780055 ~ 2780524 (+)
G225419 NA non-coding downstream 296883 2934890 ~ 2937696 (+)
G225420 NA non-coding downstream 301381 2939388 ~ 2945892 (+)
G225428 NA non-coding downstream 315400 2953407 ~ 2953726 (+)
kcna1b LOC107101449,LOC101167438,LOC104943874,LOC101481979,LOC102202784,LOC103382518 other upstream 141969 2479638 ~ 2494498 (+)
G224728 NA other upstream 339465 2163643 ~ 2297002 (+)
phf21b phf21b,LOC102797984 other upstream 348077 2133689 ~ 2288390 (+)
G224700 NA other upstream 627952 2006584 ~ 2008515 (+)
G224705 rpl18a other upstream 685815 1943566 ~ 1950652 (+)
G224811 LOC106958509,LOC107690788,LOC107671222,LOC107574171,LOC107579420 other downstream 4529 2642536 ~ 2663134 (+)
G225344 NA other downstream 102377 2740384 ~ 2763586 (+)
G225394 NA other downstream 212146 2850153 ~ 2850596 (+)
G225445 NA other downstream 491937 3129944 ~ 3131302 (+)
LOC120553724 lgr5,LOC102312898,LOC102787110 other downstream 538533 3176540 ~ 3246203 (+)

Expression


Co-expression Network