G225344


Basic Information

Item Value
gene id G225344
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 2740384 ~ 2763586 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU305536
acgcgcacgcacacatacacacacacttgcacgcacatacacacacttgcacacacacacacacacacgcgcacacatacacacacacttgcacacacatacacacacacacttgcacacacacacacaaatacacctacttgcacacacatacacacacacttgcacgggcacacatacacacacatgcacacacatgcacacacacacacacacaaactctcatacatacacgcacacacacacacacaaactcatacatacatacatacacacgcactcatacacatatacgCACACGcaaacatgcgcacacacagacacagagacacacacagacacacagagacacacacacacacacacagacacagagacacacacagacacacagagacacacacacacagagacacacacacacagacacacacacacagagacacacacacacagacacacacacacacacacagacacacacagagagacacacacacacacacacacacacacatacagagacacacacagacacacatacagagacacacacacacacagagacagacacacacacacacagagacagacacacacatacagagacacacacacacacatacacacacacacagagacagacacacacacacacatacacacacacacacacacacacacacacacacacacacacacacacacacacacacagcctatttCAAGGTATTGGAGTGaccatcacaaa
>TU305537
acgcgcacgcacacatacacacacacttgcacgcacatacacacacttgcacacacacacacacacacgcgcacacatacacacacacttgcacacacatacacacacacacttgcacacacacacacaaatacacctacttgcacacacatacacacacacttgcacgggcacacatacacacacatgcacacacatgcacacacacacacacacaaactctcatacatacacgcacacacacacacacaaactcatacatacatacatacacacgcactcatacacatatacgCACACGcaaacatgcgcacacacagacacagagacacacacagacacacagagacacacacacacacacacagacacagagacacacacagacacacagagacacacacacacagagacacacacacacagacacacacacacagagacacacacacacagacacacacacacacagacacacacacacagacacacacacacacagacacacacacacacacacacacagacatacacacacagacacacacacacacagacatacacacacagacacacacacgcacagagacacacacacacacacacacacacacacagacacacacacacagacacacacacacacagacacacacacag
>TU305539
acgcgcacgcacacatacacacacacttgcacgcacatacacacacttgcacacacacacacacacacgcgcacacatacacacacacttgcacacacatacacacacacacttgcacacacacacacaaatacacctacttgcacacacatacacacacacttgcacgggcacacatacacacacatgcacacacatgcacacacacacacacacaaactctcatacatacacgcacacacacacacacaaactcatacatacatacatacacacgcactcatacacatatacgCACACGcaaacatgcgcacacacagacacagagacacacacagacacacagagacacacacacacacacacagacacagagacacacacagacacacagagacacacacacacagacacacacacacacagacacacacacacagagacacacacacacagacacacacacacacagacacacacacacagacacacacacacagagacacacacacagacacacac
>TU305540
acgcgcacgcacacatacacacacacttgcacgcacatacacacacttgcacacacacacacacacacgcgcacacatacacacacacttgcacacacatacacacacacacttgcacacacacacacaaatacacctacttgcacacacatacacacacacttgcacgggcacacatacacacacatgcacacacatgcacacacacacacacacaaactctcatacatacacgcacacacacacacacaaactcatacatacatacatacacacgcactcatacacatatacgCACACGcaaacatgcgcacacacagacacagagacacacacagacacacagagacacacacacacacacacagacacacacacacagacacacacacacacacagacacacacacacagagacacacacacacagacacacacacacacagacacacacacacagacacacacacacagagacacacacacagacacacac
>TU305541
acgcgcacgcacacatacacacacacttgcacgcacatacacacacttgcacacacacacacacacacgcgcacacatacacacacacttgcacacacatacacacacacacttgcacacacacacacaaatacacctacttgcacacacatacacacacacttgcacgggcacacatacacacacatgcacacacatgcacacacacacacacacaaactctcatacatacacgcacacacacacacacaaactcatacatacatacatacacacgcactcatacacatatacgCACACGcaaacatgcgcacacacagacacagagacacacacagacacacagagacacacacacacacacacagacacagagacacacacagacacacagagacacacacacacagagacacacacacacagacacacacacacagagacacacacacacagacacacacacacacacacagacacacacagacacacacacacacacagagacacacacacacacacggcctgtttctctctcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU305536 True 751 TUCP 0.48 3 2740384 2763586
TU305537 False 660 lncRNA 0.49 5 2740384 2749649
TU305539 False 522 lncRNA 0.49 3 2740384 2750398
TU305540 False 496 lncRNA 0.49 3 2740384 2750398
TU305541 False 539 lncRNA 0.49 2 2740384 2741010

Neighbor

gene id symbol gene type direction distance location
LOC120553722 LOC101167724,LOC101068541,LOC103395674 coding upstream 46542 2688893 ~ 2693842 (+)
LOC120553365 LOC108262407,LOC107719244 coding upstream 48423 2691410 ~ 2691961 (+)
LOC120553363 LOC108414267,LOC102204254,LOC108269716,LOC108261415,LOC103379246,LOC103381127 coding upstream 55269 2683792 ~ 2685115 (+)
LOC120553360 NA coding upstream 57942 2681042 ~ 2682442 (+)
trnae-cuc_31 NA coding upstream 62850 2677463 ~ 2677534 (+)
LOC120553800 kcnmb4,LOC102792035 coding downstream 34881 2798467 ~ 2857665 (+)
trnat-ugu_8 NA coding downstream 115505 2879091 ~ 2879163 (+)
trnat-ugu_9 NA coding downstream 116532 2880118 ~ 2880190 (+)
trnat-ugu_10 NA coding downstream 119246 2882832 ~ 2882904 (+)
trnat-cgu_7 NA coding downstream 120280 2883866 ~ 2883938 (+)
G224808 NA non-coding upstream 102377 2636467 ~ 2638007 (+)
G224799 NA non-coding upstream 104283 2580720 ~ 2636101 (+)
G224798 NA non-coding upstream 105271 2632570 ~ 2635113 (+)
G224800 NA non-coding upstream 120576 2563609 ~ 2619808 (+)
G224797 NA non-coding upstream 127162 2547530 ~ 2613222 (+)
G225377 NA non-coding downstream 16469 2780055 ~ 2780524 (+)
G225419 NA non-coding downstream 171304 2934890 ~ 2937696 (+)
G225420 NA non-coding downstream 175802 2939388 ~ 2945892 (+)
G225428 NA non-coding downstream 189821 2953407 ~ 2953726 (+)
G225432 NA non-coding downstream 199803 2963389 ~ 2964031 (+)
G224811 LOC106958509,LOC107690788,LOC107671222,LOC107574171,LOC107579420 other upstream 77250 2642536 ~ 2663134 (+)
kcna1b LOC107101449,LOC101167438,LOC104943874,LOC101481979,LOC102202784,LOC103382518 other upstream 245886 2479638 ~ 2494498 (+)
G224728 NA other upstream 443382 2163643 ~ 2297002 (+)
phf21b phf21b,LOC102797984 other upstream 451994 2133689 ~ 2288390 (+)
G224700 NA other upstream 731869 2006584 ~ 2008515 (+)
G225394 NA other downstream 86567 2850153 ~ 2850596 (+)
G225445 NA other downstream 366358 3129944 ~ 3131302 (+)
LOC120553724 lgr5,LOC102312898,LOC102787110 other downstream 412954 3176540 ~ 3246203 (+)
nots LOC104935800 other downstream 589262 3352848 ~ 3377335 (+)
shank3b LOC103368171,LOC102784289,LOC102309694,LOC101473766,LOC102207252,LOC103382509,LOC107374533,LOC103154279 other downstream 656777 3420363 ~ 3506467 (+)

Expression


Co-expression Network