G225346


Basic Information

Item Value
gene id G225346
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 2756389 ~ 2758407 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU305548
taacggtaggctaacgttacctgctgccaagtgtagtgttaactagctaacggtaggctaacgttacctgctgccaagcgtagtgttaactagctaacggtaggctaacgttacctgctgccaagtgaagtgttaactagctaacggtaggctaacgttacctgctgccaagtgaagtgttaactagctaacggtatgctaacgttacctgctgcctagtgttaactagcgccccgtgcagcgatgtttcggttgactctaacgtccgtttaggagcatcagagagaagcgcaggctattcggtccggtagataacggtcgttagggcgCCTGTCAGTGCCGTAGCAAcgggtctcggtaacagctgaatattctctctcatgatgaaaaagtagagacgattgtagacgaaaatgaagagagattttatcttagtttttattttatgcaaaacattttagtctcgtcttttttcgtcaacaataatgcacgtTCATTTAGTCTTAGTCGGCGTTTTTGGACATCGGCGCAGTCTCGTCTTAGtcgtggaaaaaaaggtcgttgacgaacatatttagtctcgtctcgtctgacgaaattaacgctaacagaaaggtgtctgacgcggcgctgctgctgctgctgctagccttgtgtgtacacatggatgtttcccattgatgaAATGAAATCCCATGTTAAacctaaacatattctgatctgattacagcaaagacaacgtcggcagtattgacggcaaaaataggctccagaatatttccttccgtcttgacaggtgcaatattagaaaatcaataattattttattattttattacatttatatcaaaaccttgagactttcaaacatcaacatgtcatttattaatatgcatttgtgtctaagcGACATATAAACTTCTTAATCTTAATTTCGTGCTCGCATTTTCGGCACTgacacgcagccagtgtgtaaccgcagtacttttatttatgtatttatttgattaggacagtgcacattaatgaacatttctgtaaatgcgccagtgttagccaattggttaattttcaactgtagtcctagtttgcctagcatgcatgtcttttatggtgggaagaaaccggagcacacccacccccccaaacatgcaaactccacacagaaaggtctGGAACAACCTGgcttcgaacccagaaccttcttgctgtgaggcagaagtgctgaCCACTTTTAGTGTAATTTGTAACTTGTAATGTGACGCCGACTCGGCAAGTCGTGTGGCAAAAATGTTCGCCGACTTCCCCGAGTTAGCGTTCCGACATTAGGTGACGTTCACACGAATTATTCCGATTATTCCGACACCGCCTGAACGCAGCATTCAGCTTCATATTCAGAGGGCGTTATCAATCTGAACATCTTAACTGTCAGCTGTTAAGCGCATTTTTACCAAAATGTTCGAAAGCTTTCCTTCCGAGATCTTTGCCACTCCACCAAAAGACAACCGACAAGAAGTCcccatatttcttttttaagctaaatttaaaatgatttcctttttctTACGTTGTTTTTAAACTTACTCCAGGAGGCACCAATGTacaagtatgtatatatatatatgtattttaatatatatacatatacatacagacaAGGCAGTATTTTTaagaaaaaggggaaaaactaaaaatgtgtgTGACGCGAGGAGACCCTTCCTGTGCTGGCCGCCAGTAAACGATGCAATACAAGACTTCCTGTTAACGGAAACCCAACATGGAGACAGTTTTACAGGGGACCACGCTCCACGACGCCGACAAAAACCAACCGACAACCTTCTTTGGGCTTTTCATCTGTTGCCCGACTCGTTCACACTGCAGCAGCAAAAAGCCAAGGACACGCCCACAGATTTGATTGGAGGACGAGGACTGAGGCACTTGGGCCGTTTTGGCTGTTTTATTAAATATGGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU305548 True 1972 lncRNA 0.43 2 2756389 2758407

Neighbor

gene id symbol gene type direction distance location
LOC120553634 LOC103366440 coding upstream 4707 2714117 ~ 2751682 (+)
LOC120553722 LOC101167724,LOC101068541,LOC103395674 coding upstream 62547 2688893 ~ 2693842 (+)
LOC120553365 LOC108262407,LOC107719244 coding upstream 64428 2691410 ~ 2691961 (+)
LOC120553363 LOC108414267,LOC102204254,LOC108269716,LOC108261415,LOC103379246,LOC103381127 coding upstream 71274 2683792 ~ 2685115 (+)
LOC120553360 NA coding upstream 73947 2681042 ~ 2682442 (+)
LOC120553800 kcnmb4,LOC102792035 coding downstream 40060 2798467 ~ 2857665 (+)
trnat-ugu_8 NA coding downstream 120684 2879091 ~ 2879163 (+)
trnat-ugu_9 NA coding downstream 121711 2880118 ~ 2880190 (+)
trnat-ugu_10 NA coding downstream 124425 2882832 ~ 2882904 (+)
trnat-cgu_7 NA coding downstream 125459 2883866 ~ 2883938 (+)
G224808 NA non-coding upstream 118382 2636467 ~ 2638007 (+)
G224799 NA non-coding upstream 120288 2580720 ~ 2636101 (+)
G224798 NA non-coding upstream 121276 2632570 ~ 2635113 (+)
G224800 NA non-coding upstream 136581 2563609 ~ 2619808 (+)
G224797 NA non-coding upstream 143167 2547530 ~ 2613222 (+)
G225377 NA non-coding downstream 21648 2780055 ~ 2780524 (+)
G225419 NA non-coding downstream 176483 2934890 ~ 2937696 (+)
G225420 NA non-coding downstream 180981 2939388 ~ 2945892 (+)
G225428 NA non-coding downstream 195000 2953407 ~ 2953726 (+)
G225432 NA non-coding downstream 204982 2963389 ~ 2964031 (+)
G224811 LOC106958509,LOC107690788,LOC107671222,LOC107574171,LOC107579420 other upstream 93255 2642536 ~ 2663134 (+)
kcna1b LOC107101449,LOC101167438,LOC104943874,LOC101481979,LOC102202784,LOC103382518 other upstream 261891 2479638 ~ 2494498 (+)
G224728 NA other upstream 459387 2163643 ~ 2297002 (+)
phf21b phf21b,LOC102797984 other upstream 467999 2133689 ~ 2288390 (+)
G224700 NA other upstream 747874 2006584 ~ 2008515 (+)
G225394 NA other downstream 91746 2850153 ~ 2850596 (+)
G225445 NA other downstream 371537 3129944 ~ 3131302 (+)
LOC120553724 lgr5,LOC102312898,LOC102787110 other downstream 418133 3176540 ~ 3246203 (+)
nots LOC104935800 other downstream 594441 3352848 ~ 3377335 (+)
shank3b LOC103368171,LOC102784289,LOC102309694,LOC101473766,LOC102207252,LOC103382509,LOC107374533,LOC103154279 other downstream 661956 3420363 ~ 3506467 (+)

Expression


Co-expression Network