G225419


Basic Information

Item Value
gene id G225419
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 2934890 ~ 2937696 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU305662
acatttaaaaaccctTAAAATCATCCAGCAGTCGAGtcaaacagaaagagaacagggttcaccaaataataataataataagactcATAATATGAAATATTGTTGGAACAGCAACTTCAATTTGCTAACTTCAAATAGTTTGGGTCCAAATTGCGAATTTCAATTTagcttcacaataaattttggcctgCCTAGTTTTCGTCGCCTTTTCAGTGCTTTAGGTGTTTTTTTACGCTTTTATCAACGTTTTTGCTACTTTATCCAACATTTTTTGCgccttttctgattttttttttcactttttctgacatttttggcgcttttttgccaatgttttttttgttgcttatttcagcacctttttttttaatgctttaggGTGcgttttccaatgtttttgcaAATTTTTCTGACGTTCTTGGGGCTTTTTATAGAcaattttgttgcattttttggtgcttttttttcaatgtttttggcgctttttttctGAAGGaactttttgggggctttatgaggcccaaactgtaagtgagaaagctataGGAGACATGCAAAAATACAGTcaacatatttgactttttctcttaaataaaagcatgttaatAACCCTAAACATGTCTGGTCCTTAGTGgagttgagtttgacccccctgttCTAACAAAGTAAATATTTATATCCCAGAAATTCGGTTCACAACTGAACTCGTCATTTATAAATttattagatttaaaaaaaaaaaatgaaaacctggAATTCCTTGTATTcagacttttctttttccttatgAAATAGTGTGACTGTTTATGTTATAAAGTGaggtttttttttagaaagaaatTAAATATCACATTAAATTACAGtctgattaaaatgttttacagcTACTTGACAAGTATTTGATTTTATGACGTACATAAAAGTAAATATCTCAATATTACACATATAAAGCATATAAAATGTTGACATACAGCATATATTCATCATCTTATAAAAGAGTATTACATCAATATTTACATTCAGCAATATGTGTaacttaaataaacaaaaagcttATATGGAGCAGTGAGTGAGAACATAGGTatgctagaaaaaaaaaaatgagatggCTCTTTCCTTCCCTGCGATTCGCTAACATCAGATTTGAACATGTTTTTTAATAACCACCAACGACCTGAGATCAACCAGTGTTTCCCTTCAACACTAAACATAATCATTGACCACACTATTTAATAGAATTTATCTCAAAcgttaaaaacattttgttgtgACACTTGATTTTGAAAAGTTGTCAGAAGGTCACAAATAGAACAAAGAGTGTAAGctaatattaataaaaagcttCCCTGCAATCACAGCAAACACGtaaagttcctttttaattgacAGATTTTCTCTGTTTACTCTAAAAAGTGGAGTTAAAGATTTTATTGGGGGGcgttttaggcctttatttgcacaggacatgaaagggggaatgacatgcagcaaagggccacacaCTGGAGTCAAACAcgcggctgctgcgtcgaggagtaaagcTCTATATAtgcgcgcctgctctaccaggtgagctacccaggcgccctatctgctgtagttttgtTGGCATTAAACTTCCATATACCGAACTTGTTAAGAACTTGGTGTCAAAGCTGTGATACACGGTAAACATGactcattgtttgtgtttactcgcgtgtgtcaaactcaaggcccgagggccaaatccggcccgaTTTTTCAATTTAGGTTCGCAAAACATTTTGGCCTGCCAAATTTTAgtgtttgtcccttttttcccccgatgtttttttatttatttttcgaCATTTCCTGCGCCTTTTCAATGgtttagtcatttttttcaatgtttttgctaATTTTTCTGCCGtttttttttagacaattttgtctccttttttggtgccttttcaaagtttttgctaGTTTtccgagttttttttttgtccctttttctgACGTCTTTGGCGCTTCTTCCCCCCCCCACCGACGCCTTTTTCAACGTCTTTGCTAATTCttctgatgtttttggcacCGTTTCcgagtttttttgtcactttttctgatgtttttggcgTTTTTGTTTAGACAATTTTGTCGCCTTTTATGCtccttttttcaacgtttttgtcactttttttctgatggctaaggaactttttcgGGGGCTTGATGAGGCCCAAACTAtaagtgagaaagctatatgagacatgcaataatacagtcaaaatatttgactttttctcttaaataaaagcatgttaatgacctaaacatgtctggcccttagtggagttgagtttgacccccctgagTTAAACAGTAATATCTCATATcacttgtgtttgtgtctttacaTATATTGCTGTATTTTCCCGGTGTTGTGTAGCCAACGTTCTTTAATAAAACTTTTTTATTCCGGTGTAGATGAAATCTGAGGAGGGACCAATAAACGATAATTAAGCACATAGATATGTTATAAGACAAGACATAGATAGGTTATAAGACAAGACATAGACATGTTATAAGACA
>TU305664
acatttaaaaaccctTAAAATCATCCAGCAGTCGAGtcaaacagaaagagaacagggttcaccaaataataataataataagactcATAATATGAAATATTGTTGGAACAGCAACTTCAATTTGCTAACTTCAAATAGTTTGGGTCCAAATTGCGAATTTCAATTTagcttcacaataaattttggcctgCCTAGTTTTCGTCGCCTTTTCAGTGCTTTAGGTGTTTTTTTACGCTTTTATCAACGTTTTTGCTACTTTATCCAACATTTTTTGCgccttttctgattttttttttcactttttctgacatttttggcgcttttttgccaatgttttttttgttgcttatttcagcacctttttttttaatgctttaggGTGcgttttccaatgtttttgcaAATTTTTCTGACGTTCTTGGGGCTTTTTATAGAcaattttgttgcattttttggtgcttttttttcaatgtttttggcgctttttttctGAAGGaactttttgggggctttatgaggcccaaactgtaagtgagaaagctataGGAGACATGCAAAAATACAGTcaacatatttgactttttctcttaaataaaagcatgttaatAACCCTAAACATGTCTGGTCCTTAGTGgagttgagtttgacccccctgttCTAACAAAGTAAATATTTATATCCCAGAAATTCGGTTCACAACTGAACTCGTCATTTATAAATttattagatttaaaaaaaaaaaatgaaaacctggAATTCCTTGTATTcagacttttctttttccttatgAAATAGTGTGACTGTTTATGTTATAAAGTGaggtttttttttagaaagaaatTAAATATCACATTAAATTACAGtctgattaaaatgttttacagcTACTTGACAAGTATTTGATTTTATGACGTACATAAAAGTAAATATCTCAATATTACACATATAAAGCATATAAAATGTTGACATACAGCATATATTCATCATCTTATAAAAGAGTATTACATCAATATTTACATTCAGCAATATGTGTaacttaaataaacaaaaagcttATATGGAGCAGTGAGTGAGAACATAGGTatgctagaaaaaaaaaaatgagatggCTCTTTCCTTCCCTGCGATTCGCTAACATCAGATTTGAACATGTTTTTTAATAACCACCAACGACCTGAGATCAACCAGTGTTTCCCTTCAACACTAAACATAATCATTGACCACACTATTTAATAGAATTTATCTCAAAcgttaaaaacattttgttgtgACACTTGATTTTGAAAAGTTGTCAGAAGGTCACAAATAGAACAAAGAGTGTAAGctaatattaataaaaagcttCCCTGCAATCACAGCAAACACGtaaagttcctttttaattgacAGATTTTCTCTGTTTACTCTAAAAAGTGGAGTTAAAGATTTTATTGGGGGGcgttttaggcctttatttgcacaggacatgaaagggggaatgacatgcagcaaagggccacacaCTGGAGTCAAACAcgcggctgctgcgtcgaggagtaaagcTCTATATAtgcgcgcctgctctaccaggtgagctacccaggcgccctatctgctgtagttttgtTGGCATTAAACTTCCATATACCGAACTTGTTAAGAACTTGGTGTCAAAGCTGTGATACACGGTAAACATGactcattgtttgtgtttactcgcgtgtgtcaaactcaaggcccgagggccaaatccggcccgaTTTTTCAATTTAGGTTCGCAAAACATTTTGGCCTGCCAAATTTTAgtgtttgtcccttttttcccccgatgtttttttatttatttttcgaCATTTCCTGCGCCTTTTCAATGgtttagtcatttttttcaatgtttttgctaATTTTTCTGCCGtttttttttagacaattttgtctccttttttggtgccttttcaaagtttttgctaGTTTtccgagttttttttttgtccctttttctgACGTCTTTGGCGCTTCttctgatgtttttggcacCGTTTCcgagtttttttgtcactttttctgatgtttttggcgTTTTTGTTTAGACAATTTTGTCGCCTTTTATGCtccttttttcaacgtttttgtcactttttttctgatggctaaggaactttttcgGGGGCTTGATGAGGCCCAAACTAtaagtgagaaagctatatgagacatgcaataatacagtcaaaatatttgactttttctcttaaataaaagcatgttaatgacctaaacatgtctggcccttagtggagttgagtttgacccccctgagTTAAACAGTAATATCTCATATcacttgtgtttgtgtctttacaTATATTGCTGTATTTTCCCGGTGTTGTGTAGCCAACGTTCTTTAATAAAACTTTTTTATTCCGGTGTAGATGAAATCTGAGGAGGGACCAATAAACGATAATTAAGCACATAGATATGTTATAAGACAAGGCATAGATATGTTATAAGACAAGACATAGATAGGTTATAAGACAAGACATAGATAGGTTATAAGACAAGACATAGACATGTTATAAGACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU305662 False 2556 lncRNA 0.35 2 2934890 2937696
TU305664 True 2559 lncRNA 0.34 3 2934890 2937696

Neighbor

gene id symbol gene type direction distance location
trnat-ugu_32 NA coding upstream 2161 2932657 ~ 2932729 (+)
trnat-ugu_31 NA coding upstream 10695 2924123 ~ 2924195 (+)
trnat-ugu_30 NA coding upstream 12324 2922494 ~ 2922566 (+)
trnat-ugu_29 NA coding upstream 12988 2921830 ~ 2921902 (+)
trnat-ugu_28 NA coding upstream 14025 2920793 ~ 2920865 (+)
LOC120553565 NA coding downstream 173145 3110841 ~ 3117640 (+)
LOC120553725 NA coding downstream 322983 3260679 ~ 3302750 (+)
cct2 cct2 coding downstream 391254 3328950 ~ 3347986 (+)
LOC120553119 LOC104957567 coding downstream 609043 3546739 ~ 3567593 (+)
cand1 cand1 coding downstream 798786 3736482 ~ 3800595 (+)
G225377 NA non-coding upstream 154366 2780055 ~ 2780524 (+)
G225346 NA non-coding upstream 176483 2756389 ~ 2758407 (+)
G224808 NA non-coding upstream 296883 2636467 ~ 2638007 (+)
G224799 NA non-coding upstream 298789 2580720 ~ 2636101 (+)
G224798 NA non-coding upstream 299777 2632570 ~ 2635113 (+)
G225420 NA non-coding downstream 1692 2939388 ~ 2945892 (+)
G225428 NA non-coding downstream 15711 2953407 ~ 2953726 (+)
G225432 NA non-coding downstream 25693 2963389 ~ 2964031 (+)
G225460 NA non-coding downstream 110452 3048148 ~ 3051632 (+)
G225466 NA non-coding downstream 122357 3060053 ~ 3069310 (+)
G225394 NA other upstream 84294 2850153 ~ 2850596 (+)
G225344 NA other upstream 171304 2740384 ~ 2763586 (+)
G224811 LOC106958509,LOC107690788,LOC107671222,LOC107574171,LOC107579420 other upstream 271756 2642536 ~ 2663134 (+)
kcna1b LOC107101449,LOC101167438,LOC104943874,LOC101481979,LOC102202784,LOC103382518 other upstream 440392 2479638 ~ 2494498 (+)
G224728 NA other upstream 637888 2163643 ~ 2297002 (+)
G225445 NA other downstream 192248 3129944 ~ 3131302 (+)
LOC120553724 lgr5,LOC102312898,LOC102787110 other downstream 238844 3176540 ~ 3246203 (+)
nots LOC104935800 other downstream 415152 3352848 ~ 3377335 (+)
shank3b LOC103368171,LOC102784289,LOC102309694,LOC101473766,LOC102207252,LOC103382509,LOC107374533,LOC103154279 other downstream 482667 3420363 ~ 3506467 (+)
trnat-ugu_33 NA other downstream 572384 3510080 ~ 3510152 (+)

Expression


Co-expression Network