G225475


Basic Information

Item Value
gene id G225475
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 3175912 ~ 3195624 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU305731
gcacacacacgcacacacgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacactcacacacactcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacactcacacacacacacacacagatacagacacacacactcacactcacactcacacagatatacagacagacacagacacacagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagacagacagacagacagacacacacacacacacacacagacagacacacacacacacacacacacacacacacacagagagacacccacacagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacccacacagacacacacacacacatacacacacacacacacacacacacacacacacacacacacac
>TU305732
acacacacacacacacacacaacacagacacacacacacacacacacacacacacaacaacacagacacacacacacacacacagacacacacacacacacacacacccacagacacacagacacacacacacacacacacacacacccacagacacacagacagacacacacacacacacacacacacacacacacagagagacacccacacagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacccacacagacacacacacacacatacacacacacacacacacacacacacacacacacacacacac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU305731 True 560 lncRNA 0.50 2 3194891 3195624
TU305732 False 341 lncRNA 0.50 3 3175912 3195624

Neighbor

gene id symbol gene type direction distance location
LOC120553565 NA coding upstream 58272 3110841 ~ 3117640 (+)
trnat-ugu_32 NA coding upstream 243183 2932657 ~ 2932729 (+)
trnat-ugu_31 NA coding upstream 251717 2924123 ~ 2924195 (+)
trnat-ugu_30 NA coding upstream 253346 2922494 ~ 2922566 (+)
trnat-ugu_29 NA coding upstream 254010 2921830 ~ 2921902 (+)
LOC120553725 NA coding downstream 65055 3260679 ~ 3302750 (+)
cct2 cct2 coding downstream 133326 3328950 ~ 3347986 (+)
LOC120553119 LOC104957567 coding downstream 351115 3546739 ~ 3567593 (+)
cand1 cand1 coding downstream 540858 3736482 ~ 3800595 (+)
mdm1 NA coding downstream 646372 3841996 ~ 3873319 (+)
LOC120553060 NA non-coding upstream 68284 3104725 ~ 3107628 (+)
G225467 NA non-coding upstream 102344 3072934 ~ 3073568 (+)
G225466 NA non-coding upstream 106602 3060053 ~ 3069310 (+)
G225460 NA non-coding upstream 124280 3048148 ~ 3051632 (+)
G225432 NA non-coding upstream 211881 2963389 ~ 2964031 (+)
G225481 NA non-coding downstream 32052 3227676 ~ 3228033 (+)
G225448 NA non-coding downstream 50743 3246367 ~ 3249323 (+)
G225447 NA non-coding downstream 54418 3250042 ~ 3252294 (+)
G225485 NA non-coding downstream 79104 3274728 ~ 3287337 (+)
G225489 NA non-coding downstream 111390 3307014 ~ 3308044 (+)
G225445 NA other upstream 44610 3129944 ~ 3131302 (+)
G225394 NA other upstream 325316 2850153 ~ 2850596 (+)
G225344 NA other upstream 412326 2740384 ~ 2763586 (+)
G224811 LOC106958509,LOC107690788,LOC107671222,LOC107574171,LOC107579420 other upstream 512778 2642536 ~ 2663134 (+)
kcna1b LOC107101449,LOC101167438,LOC104943874,LOC101481979,LOC102202784,LOC103382518 other upstream 681414 2479638 ~ 2494498 (+)
nots LOC104935800 other downstream 157224 3352848 ~ 3377335 (+)
shank3b LOC103368171,LOC102784289,LOC102309694,LOC101473766,LOC102207252,LOC103382509,LOC107374533,LOC103154279 other downstream 224739 3420363 ~ 3506467 (+)
trnat-ugu_33 NA other downstream 314456 3510080 ~ 3510152 (+)
trnat-ugu_34 NA other downstream 321926 3517550 ~ 3517622 (+)
trnat-ugu_35 NA other downstream 322837 3518461 ~ 3518533 (+)

Expression


Co-expression Network