G225550


Basic Information

Item Value
gene id G225550
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 3353454 ~ 3362929 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU305889
cagtgcaagtaatcaggttgttttttttgtcttttgttggctcacttttactcacaacatgctaagcggcaacataggattccattcactacgctaagctaactagcggtgctgccggtgttgcaccggactaaaacgatgcatgcacataaaatgcgttggcccacctatctacagctagaggagacctcacctatctacagctagaggagaccccacctatctacagctagaggagaccccacctatctacagctagaggagaccccacccatCTACACGCCAGGGGAGACCTCacccatctacagctagaggagaccccacctatctacagctaggggagacctcacctatctacagctaggggagacctcacctatctacagctagaggagaccccacctatctacagctaggggagacctcacctatctacagctaggggagaccccacctatctacagctagaggagaccccacctatctacagctagaggagaccccacctatctacagctaggggagaccccacctatctacagctagaggagaccccacctatctacagctaggggagaccccacctatctacagctagaggagacctcacctatctacagctagaggagaccccacctatctacagctaggggagacctcacctatctacagctagaggagacctcacctatctacagctaggggagaccccacctatctacagctaagggagacc

Function

NR:

description
LWamide neuropeptide

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU305889 True 736 lncRNA 0.52 3 3353454 3362929

Neighbor

gene id symbol gene type direction distance location
cct2 cct2 coding upstream 5468 3328950 ~ 3347986 (+)
LOC120553725 NA coding upstream 50704 3260679 ~ 3302750 (+)
LOC120553565 NA coding upstream 235814 3110841 ~ 3117640 (+)
trnat-ugu_32 NA coding upstream 420725 2932657 ~ 2932729 (+)
trnat-ugu_31 NA coding upstream 429259 2924123 ~ 2924195 (+)
LOC120553119 LOC104957567 coding downstream 183810 3546739 ~ 3567593 (+)
cand1 cand1 coding downstream 373553 3736482 ~ 3800595 (+)
mdm1 NA coding downstream 479067 3841996 ~ 3873319 (+)
il22 NA coding downstream 519244 3882173 ~ 3888180 (+)
LOC120553047 NA coding downstream 635805 3998734 ~ 4019042 (+)
G225542 NA non-coding upstream 644 3352531 ~ 3352810 (+)
G225489 NA non-coding upstream 45410 3307014 ~ 3308044 (+)
G225485 NA non-coding upstream 66117 3274728 ~ 3287337 (+)
G225447 NA non-coding upstream 101160 3250042 ~ 3252294 (+)
G225448 NA non-coding upstream 104131 3246367 ~ 3249323 (+)
G225549 NA non-coding downstream 57554 3420483 ~ 3420957 (+)
G225561 NA non-coding downstream 115565 3478494 ~ 3546916 (+)
G225570 NA non-coding downstream 206593 3569522 ~ 3627258 (+)
G225571 lsm8,LOC106596712,LOC106589648 non-coding downstream 207839 3570768 ~ 3574316 (+)
G225575 NA non-coding downstream 212121 3575050 ~ 3576021 (+)
LOC120553724 lgr5,LOC102312898,LOC102787110 other upstream 107251 3176540 ~ 3246203 (+)
G225445 NA other upstream 222152 3129944 ~ 3131302 (+)
G225394 NA other upstream 502858 2850153 ~ 2850596 (+)
G225344 NA other upstream 589868 2740384 ~ 2763586 (+)
G224811 LOC106958509,LOC107690788,LOC107671222,LOC107574171,LOC107579420 other upstream 690320 2642536 ~ 2663134 (+)
shank3b LOC103368171,LOC102784289,LOC102309694,LOC101473766,LOC102207252,LOC103382509,LOC107374533,LOC103154279 other downstream 57434 3420363 ~ 3506467 (+)
trnat-ugu_33 NA other downstream 147151 3510080 ~ 3510152 (+)
trnat-ugu_34 NA other downstream 154621 3517550 ~ 3517622 (+)
trnat-ugu_35 NA other downstream 155532 3518461 ~ 3518533 (+)
trnat-ugu_36 NA other downstream 158503 3521432 ~ 3521505 (+)

Expression


Co-expression Network