G225561


Basic Information

Item Value
gene id G225561
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 3478494 ~ 3546916 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU305900
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgactgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttcttgtttaactatattcgtggggtcca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU305900 True 222 lncRNA 0.49 2 3478494 3546916

Neighbor

gene id symbol gene type direction distance location
cct2 cct2 coding upstream 130508 3328950 ~ 3347986 (+)
LOC120553725 NA coding upstream 175744 3260679 ~ 3302750 (+)
LOC120553565 NA coding upstream 360854 3110841 ~ 3117640 (+)
trnat-ugu_32 NA coding upstream 545765 2932657 ~ 2932729 (+)
trnat-ugu_31 NA coding upstream 554299 2924123 ~ 2924195 (+)
cand1 cand1 coding downstream 189566 3736482 ~ 3800595 (+)
mdm1 NA coding downstream 295080 3841996 ~ 3873319 (+)
il22 NA coding downstream 335257 3882173 ~ 3888180 (+)
LOC120553047 NA coding downstream 451818 3998734 ~ 4019042 (+)
LOC120553050 NA coding downstream 546744 4093660 ~ 4107645 (+)
G225549 NA non-coding upstream 57537 3420483 ~ 3420957 (+)
G225550 NA non-coding upstream 115565 3353454 ~ 3362929 (+)
G225542 NA non-coding upstream 125684 3352531 ~ 3352810 (+)
G225489 NA non-coding upstream 170450 3307014 ~ 3308044 (+)
G225485 NA non-coding upstream 191157 3274728 ~ 3287337 (+)
G225570 NA non-coding downstream 22606 3569522 ~ 3627258 (+)
G225571 lsm8,LOC106596712,LOC106589648 non-coding downstream 23852 3570768 ~ 3574316 (+)
G225575 NA non-coding downstream 28134 3575050 ~ 3576021 (+)
G225566 NA non-coding downstream 30703 3577619 ~ 3616179 (+)
G225580 NA non-coding downstream 59913 3606829 ~ 3713336 (+)
nots LOC104935800 other upstream 101159 3352848 ~ 3377335 (+)
LOC120553724 lgr5,LOC102312898,LOC102787110 other upstream 232291 3176540 ~ 3246203 (+)
G225445 NA other upstream 347192 3129944 ~ 3131302 (+)
G225394 NA other upstream 627898 2850153 ~ 2850596 (+)
G225344 NA other upstream 714908 2740384 ~ 2763586 (+)
LOC120553144 rap1b,LOC101070080,LOC100707998,LOC103368175,LOC102210937 other downstream 267565 3814481 ~ 3841174 (+)
LOC120553793 NA other downstream 388758 3935674 ~ 3938954 (+)
G225894 NA other downstream 1110528 4657444 ~ 4657969 (+)
abcc9 abcc9,LOC107387088 other downstream 1734342 5281258 ~ 5373637 (+)
prkcq prkcq,LOC102789446 other downstream 3113604 6660520 ~ 6686639 (+)

Expression


Co-expression Network