G225575


Basic Information

Item Value
gene id G225575
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 3575050 ~ 3576021 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU305920
CGTCTGAGGTGACGATGGCAACGGTACCTGAATGGTTGATGTAGCTCTCCAGAGCGGTGGACATGGTTCCTGCCGGGCTCGGCGTTTATTTATCCAGCAGAGAGCTCGGTTAATATTCCCACCGGTTCGCTGGTGGTCCAAACGTTGCGGGAACGTGACGGAGAAACAGCGACAGGCAGATGCTAACCGATGCTAACAGCGTCAACACAGAACACACCGGAGGAGAAAACAGACCGAACTAATCTGCTGCCGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU305920 True 253 lncRNA 0.55 2 3575050 3576021

Neighbor

gene id symbol gene type direction distance location
LOC120553119 LOC104957567 coding upstream 7457 3546739 ~ 3567593 (+)
cct2 cct2 coding upstream 227064 3328950 ~ 3347986 (+)
LOC120553725 NA coding upstream 272300 3260679 ~ 3302750 (+)
LOC120553565 NA coding upstream 457410 3110841 ~ 3117640 (+)
trnat-ugu_32 NA coding upstream 642321 2932657 ~ 2932729 (+)
cand1 cand1 coding downstream 160461 3736482 ~ 3800595 (+)
mdm1 NA coding downstream 265975 3841996 ~ 3873319 (+)
il22 NA coding downstream 306152 3882173 ~ 3888180 (+)
LOC120553047 NA coding downstream 422713 3998734 ~ 4019042 (+)
LOC120553050 NA coding downstream 517639 4093660 ~ 4107645 (+)
G225571 lsm8,LOC106596712,LOC106589648 non-coding upstream 734 3570768 ~ 3574316 (+)
G225561 NA non-coding upstream 28134 3478494 ~ 3546916 (+)
G225549 NA non-coding upstream 154093 3420483 ~ 3420957 (+)
G225550 NA non-coding upstream 212121 3353454 ~ 3362929 (+)
G225542 NA non-coding upstream 222240 3352531 ~ 3352810 (+)
G225566 NA non-coding downstream 1598 3577619 ~ 3616179 (+)
G225580 NA non-coding downstream 30808 3606829 ~ 3713336 (+)
G225581 NA non-coding downstream 32955 3608976 ~ 3707786 (+)
G225593 NA non-coding downstream 136281 3712302 ~ 3748393 (+)
G225592 NA non-coding downstream 171836 3747857 ~ 3801170 (+)
trnat-ugu_40 NA other upstream 40378 3534600 ~ 3534672 (+)
trnat-ugu_39 NA other upstream 41389 3533589 ~ 3533661 (+)
trnat-ugu_38 NA other upstream 42970 3532008 ~ 3532080 (+)
trnat-ugu_37 NA other upstream 46489 3528489 ~ 3528561 (+)
trnat-ugu_36 NA other upstream 53545 3521432 ~ 3521505 (+)
LOC120553144 rap1b,LOC101070080,LOC100707998,LOC103368175,LOC102210937 other downstream 238460 3814481 ~ 3841174 (+)
LOC120553793 NA other downstream 359653 3935674 ~ 3938954 (+)
G225894 NA other downstream 1081423 4657444 ~ 4657969 (+)
abcc9 abcc9,LOC107387088 other downstream 1705237 5281258 ~ 5373637 (+)
prkcq prkcq,LOC102789446 other downstream 3084499 6660520 ~ 6686639 (+)

Expression


Co-expression Network