G225592


Basic Information

Item Value
gene id G225592
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 3747857 ~ 3801170 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU305940
tcccctaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagacacacacacacacacacacacacacacacacacacacacactcgtagTGAAACACCCTCTCCTAGCGATCGATCGTTCCATGATGCATTGCACTGAAATCAGCTGttggaagagaaaagaaagagacgTACGGCGAACACACGgacaaaaaaggacaaaaacgaaagtacaaaaaaatccagaaaaaaaaaatccagaaaaataAGTTCCATATGAAGCTTGGAAGCTCctcccacttcctgtttttgtttttctagcGAGgtcatctgattggctgatctCCCTGTTCATCATCAttcttctattttctttttctttttcttttcgttATTCCAGAAGGTTCCACAggtactgtactgtaacctgATTGGCCGCTGCTgagtgactgactgactgagttGGCGTGTTATCAAAACTGACCAATGGGAAAACGGCCTTTTATTGCCTGAGGCTGCGGTGACCAATGGGAGAAGGGCTCGCTCTGTTTTTTTTGC

Function

GO: NA

KEGG:

id description
ko03015 mRNA surveillance pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU305940 True 608 lncRNA 0.45 2 3747857 3801170

Neighbor

gene id symbol gene type direction distance location
LOC120553119 LOC104957567 coding upstream 180264 3546739 ~ 3567593 (+)
cct2 cct2 coding upstream 399871 3328950 ~ 3347986 (+)
LOC120553725 NA coding upstream 445107 3260679 ~ 3302750 (+)
LOC120553565 NA coding upstream 630217 3110841 ~ 3117640 (+)
trnat-ugu_32 NA coding upstream 815128 2932657 ~ 2932729 (+)
mdm1 NA coding downstream 40826 3841996 ~ 3873319 (+)
il22 NA coding downstream 81003 3882173 ~ 3888180 (+)
LOC120553047 NA coding downstream 197564 3998734 ~ 4019042 (+)
LOC120553050 NA coding downstream 292490 4093660 ~ 4107645 (+)
LOC120553052 NA coding downstream 354125 4155295 ~ 4175824 (+)
G225580 NA non-coding upstream 34521 3606829 ~ 3713336 (+)
G225581 NA non-coding upstream 40071 3608976 ~ 3707786 (+)
G225570 NA non-coding upstream 120599 3569522 ~ 3627258 (+)
G225602 NA non-coding downstream 10960 3812130 ~ 3812413 (+)
G225607 NA non-coding downstream 30268 3831438 ~ 3832530 (+)
G225707 NA non-coding downstream 84543 3885713 ~ 3942427 (+)
G225708 NA non-coding downstream 85454 3886624 ~ 3926965 (+)
G225721 NA non-coding downstream 195795 3996965 ~ 4051123 (+)
trnat-ugu_40 NA other upstream 213185 3534600 ~ 3534672 (+)
trnat-ugu_39 NA other upstream 214196 3533589 ~ 3533661 (+)
trnat-ugu_38 NA other upstream 215777 3532008 ~ 3532080 (+)
trnat-ugu_37 NA other upstream 219296 3528489 ~ 3528561 (+)
trnat-ugu_36 NA other upstream 226352 3521432 ~ 3521505 (+)
LOC120553144 rap1b,LOC101070080,LOC100707998,LOC103368175,LOC102210937 other downstream 13311 3814481 ~ 3841174 (+)
LOC120553793 NA other downstream 134504 3935674 ~ 3938954 (+)
G225894 NA other downstream 856274 4657444 ~ 4657969 (+)
abcc9 abcc9,LOC107387088 other downstream 1480088 5281258 ~ 5373637 (+)
prkcq prkcq,LOC102789446 other downstream 2859350 6660520 ~ 6686639 (+)

Expression


Co-expression Network