G225607


Basic Information

Item Value
gene id G225607
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 3831438 ~ 3832530 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU305956
aagtgaaaaagcccaaagtcccccccaaagggacttaccatctccaacagaaaacactgttcaccaactgctccaaacagctctactgtagtccagcctttactctgcttctgactggctagtagtccttacctaggtactgtcagggcacgccctcatactctgcttctgactggctagtagtccttacctaggtactgtcagggcacgccctcatacgctccttctgactggctagtagtccttacctaggtactgtcaggacacgccctcatactctgcttctgactggctagtagtccttacctagctactgtcagggcacgccctcatactctgcttctgactggctagtagtccttacctagctactgtcagggcacgcgcctcatactctgcttctgactggctagtagtccttacctaggtactgtcagggcacgccctcatactctgcttctgactggctagtagtccttacctagctactgtcagggcacgccctcatactctgcttctgactggctagtagtccttacctaggtactgtcagggcacgccctcttactctgcttctgactggctagtagtccttacctaggtactgtcagggcacgccctcatactctgcttctgactggctagtagtccttacctagttactgtcagggcactccctcatactctgcccctgactggctagtagtccttccctaggtactgagcatgtgcgactcccaacaaagagaacagaagtgagatgtctcactctgtagctaaaacagagagctcaacacacagggtgaaaagaggaactgcagcaatgtgcagtacaacaaaaatatgaagttttttggaaattaaaccacataaacctattctggtacaacctctaaatacaagcatgaacctgaaaatgagcataaaatGAGCTCTTTAACCACCCTAAGCAGAAAAACAGGCCGCTAGATTCCAG

Function

GO: NA

KEGG:

id description
ko04141 Protein processing in endoplasmic reticulum

RNA

RNA id representative length rna type GC content exon number start site end site
TU305956 True 976 lncRNA 0.49 2 3831438 3832530

Neighbor

gene id symbol gene type direction distance location
cand1 cand1 coding upstream 30843 3736482 ~ 3800595 (+)
LOC120553119 LOC104957567 coding upstream 263845 3546739 ~ 3567593 (+)
cct2 cct2 coding upstream 483452 3328950 ~ 3347986 (+)
LOC120553725 NA coding upstream 528688 3260679 ~ 3302750 (+)
LOC120553565 NA coding upstream 713798 3110841 ~ 3117640 (+)
mdm1 NA coding downstream 9466 3841996 ~ 3873319 (+)
il22 NA coding downstream 49643 3882173 ~ 3888180 (+)
LOC120553047 NA coding downstream 166204 3998734 ~ 4019042 (+)
LOC120553050 NA coding downstream 261130 4093660 ~ 4107645 (+)
LOC120553052 NA coding downstream 322765 4155295 ~ 4175824 (+)
G225602 NA non-coding upstream 19025 3812130 ~ 3812413 (+)
G225592 NA non-coding upstream 30268 3747857 ~ 3801170 (+)
G225598 NA non-coding upstream 38604 3788412 ~ 3792834 (+)
G225591 NA non-coding upstream 46019 3751953 ~ 3785419 (+)
G225597 NA non-coding upstream 50036 3779257 ~ 3781402 (+)
G225707 NA non-coding downstream 53183 3885713 ~ 3942427 (+)
G225708 NA non-coding downstream 54094 3886624 ~ 3926965 (+)
G225721 NA non-coding downstream 164435 3996965 ~ 4051123 (+)
G225725 NA non-coding downstream 208875 4041405 ~ 4041726 (+)
G225785 NA non-coding downstream 305998 4138528 ~ 4140277 (+)
trnat-ugu_40 NA other upstream 296766 3534600 ~ 3534672 (+)
trnat-ugu_39 NA other upstream 297777 3533589 ~ 3533661 (+)
trnat-ugu_38 NA other upstream 299358 3532008 ~ 3532080 (+)
trnat-ugu_37 NA other upstream 302877 3528489 ~ 3528561 (+)
trnat-ugu_36 NA other upstream 309933 3521432 ~ 3521505 (+)
LOC120553793 NA other downstream 103144 3935674 ~ 3938954 (+)
G225894 NA other downstream 824914 4657444 ~ 4657969 (+)
abcc9 abcc9,LOC107387088 other downstream 1448728 5281258 ~ 5373637 (+)
prkcq prkcq,LOC102789446 other downstream 2827990 6660520 ~ 6686639 (+)
snrpf snrpf,LOC106576293 other downstream 3485987 7318517 ~ 7321189 (+)

Expression


Co-expression Network