G225708


Basic Information

Item Value
gene id G225708
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 3886624 ~ 3926965 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU306128
cacacacacacagacacagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaacacagacacacccacacacacacacacacacacacacacacacacacacacaaagacacacacaaccgCACAAAGAcaacaacccacacacacaacacacacacacatacagacacacctatacacctacacacacacgcatacacacacacacacacacacagacgcacacacacacacacacacacacacacacacacacacacacacacacacacagacgcacacacaaacacacacacacacagacgcacacacaaacacacacacagagacacacacacacacacacagacgcacacacacacacacacacagagacacacacacacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU306128 True 429 lncRNA 0.50 3 3886624 3926965

Neighbor

gene id symbol gene type direction distance location
mdm1 NA coding upstream 13305 3841996 ~ 3873319 (+)
cand1 cand1 coding upstream 86029 3736482 ~ 3800595 (+)
LOC120553119 LOC104957567 coding upstream 319031 3546739 ~ 3567593 (+)
cct2 cct2 coding upstream 538638 3328950 ~ 3347986 (+)
LOC120553725 NA coding upstream 583874 3260679 ~ 3302750 (+)
LOC120553047 NA coding downstream 71769 3998734 ~ 4019042 (+)
LOC120553050 NA coding downstream 166695 4093660 ~ 4107645 (+)
LOC120553052 NA coding downstream 228330 4155295 ~ 4175824 (+)
trnal-caa_13 NA coding downstream 259596 4186561 ~ 4186671 (+)
trnal-caa_14 NA coding downstream 261204 4188169 ~ 4188279 (+)
G225607 NA non-coding upstream 54094 3831438 ~ 3832530 (+)
G225602 NA non-coding upstream 74211 3812130 ~ 3812413 (+)
G225598 NA non-coding upstream 93790 3788412 ~ 3792834 (+)
G225591 NA non-coding upstream 101205 3751953 ~ 3785419 (+)
G225721 NA non-coding downstream 70000 3996965 ~ 4051123 (+)
G225725 NA non-coding downstream 114440 4041405 ~ 4041726 (+)
G225785 NA non-coding downstream 211563 4138528 ~ 4140277 (+)
G225790 NA non-coding downstream 237464 4164429 ~ 4165021 (+)
G225804 NA non-coding downstream 285113 4212078 ~ 4212312 (+)
LOC120553144 rap1b,LOC101070080,LOC100707998,LOC103368175,LOC102210937 other upstream 45450 3814481 ~ 3841174 (+)
trnat-ugu_40 NA other upstream 351952 3534600 ~ 3534672 (+)
trnat-ugu_39 NA other upstream 352963 3533589 ~ 3533661 (+)
trnat-ugu_38 NA other upstream 354544 3532008 ~ 3532080 (+)
trnat-ugu_37 NA other upstream 358063 3528489 ~ 3528561 (+)
LOC120553793 NA other downstream 8709 3935674 ~ 3938954 (+)
G225894 NA other downstream 730479 4657444 ~ 4657969 (+)
abcc9 abcc9,LOC107387088 other downstream 1354293 5281258 ~ 5373637 (+)
prkcq prkcq,LOC102789446 other downstream 2733555 6660520 ~ 6686639 (+)
snrpf snrpf,LOC106576293 other downstream 3391552 7318517 ~ 7321189 (+)

Expression


Co-expression Network