G225891


Basic Information

Item Value
gene id G225891
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 4652967 ~ 4653360 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU306387
ggtcaaggccacacccccaccctccaccttgcccccccctctctcctcctcaatagctacagacacagaaatggcacatcctaaggaaagctcattgtgggactggctctagtggctgtaattctgcaccaaggctgaatttcgggaaagagacttcagatacagtattaggggaccactaaggtctatataaaagagacttcagatacagtattaggggaccactaaggtctatataaaagagacttcagatacagtattaggggaccactaaggtctatataaaagagacttcagatacagtattaggggaccactaaggcctatataaaagagacttcagatacagtattaggggaccactaaggtctatataaaagcatccaaagagcac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU306387 True 394 lncRNA 0.44 1 4652967 4653360

Neighbor

gene id symbol gene type direction distance location
kics2 clg23h12orf66,LOC103364500 coding upstream 58825 4590710 ~ 4594142 (+)
LOC120553579 rab3ip coding upstream 89695 4543173 ~ 4563272 (+)
upf2 upf2 coding upstream 130353 4495890 ~ 4522614 (+)
slc35e3 slc35e3 coding upstream 160080 4483461 ~ 4492887 (+)
LOC120553538 LOC100693972,LOC102796305,LOC102207118,LOC102289868,LOC101481412 coding upstream 204930 4200672 ~ 4448037 (+)
LOC120553359 v1ar1,LOC100695840,LOC101485029 coding downstream 35567 4688927 ~ 4696183 (+)
dmtf1 NA coding downstream 80902 4734262 ~ 4749242 (+)
LOC120553055 NA coding downstream 139927 4793287 ~ 4804242 (+)
LOC120553019 NA coding downstream 581790 5235150 ~ 5238344 (+)
kcnj8 kcnj8 coding downstream 729673 5383033 ~ 5392940 (+)
G225847 NA non-coding upstream 162897 4489680 ~ 4490070 (+)
G225842 NA non-coding upstream 177840 4473611 ~ 4475127 (+)
G225802 NA non-coding upstream 199535 4450060 ~ 4453432 (+)
G225807 NA non-coding upstream 343579 4309107 ~ 4309388 (+)
G225805 NA non-coding upstream 381731 4270793 ~ 4271236 (+)
G225892 NA non-coding downstream 3135 4656495 ~ 4656819 (+)
G225895 NA non-coding downstream 4824 4658184 ~ 4658631 (+)
G225901 NA non-coding downstream 55503 4708863 ~ 4709269 (+)
G225935 NA non-coding downstream 83975 4737335 ~ 4738306 (+)
G225942 NA non-coding downstream 101647 4755007 ~ 4758772 (+)
LOC120553793 NA other upstream 714013 3935674 ~ 3938954 (+)
LOC120553144 rap1b,LOC101070080,LOC100707998,LOC103368175,LOC102210937 other upstream 811793 3814481 ~ 3841174 (+)
trnat-ugu_40 NA other upstream 1118295 3534600 ~ 3534672 (+)
trnat-ugu_39 NA other upstream 1119306 3533589 ~ 3533661 (+)
trnat-ugu_38 NA other upstream 1120887 3532008 ~ 3532080 (+)
G225894 NA other downstream 4084 4657444 ~ 4657969 (+)
abcc9 abcc9,LOC107387088 other downstream 627898 5281258 ~ 5373637 (+)
prkcq prkcq,LOC102789446 other downstream 2007160 6660520 ~ 6686639 (+)
snrpf snrpf,LOC106576293 other downstream 2665157 7318517 ~ 7321189 (+)
amdhd1 amdhd1 other downstream 2669710 7323070 ~ 7332259 (+)

Expression


Co-expression Network