G225901


Basic Information

Item Value
gene id G225901
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 4708863 ~ 4709269 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU306397
TCCTTAGGTTGCTGTGTATGCTCTGTCAGTTTGGGTAAAGTTAGCCATGTTTGCCCAATTTTACCGCGTCGTCTGGCTGCTTTCGTGTTGGGTAATCCTCTCAGAAAGATGCCGGAGGTCCTGAAAGCCTTTTCTGTTACAACCCCAATCCGAAGAAAACACATGGGAACAACATAAAACCGTCTTCTCCGACATGCTAAAGTTAGCAGTTAGCCCTTTTTGCTCCTGGATAACCCTACACGTTTTTATACCAGAGATTTGGTTTATAACAATATCCCGCCACTGGTGGGCACCGAGAAGTTTATTCTCAAGCTTTTCTTCTAAAGACAGACTTTTAAATGTCTTCTGTGGAAGATAATCCATGGTTAGCTACATGGTAACCGCACAGATATGATCTTctgttaaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU306397 True 407 lncRNA 0.43 1 4708863 4709269

Neighbor

gene id symbol gene type direction distance location
LOC120553359 v1ar1,LOC100695840,LOC101485029 coding upstream 12680 4688927 ~ 4696183 (+)
kics2 clg23h12orf66,LOC103364500 coding upstream 114721 4590710 ~ 4594142 (+)
LOC120553579 rab3ip coding upstream 145591 4543173 ~ 4563272 (+)
upf2 upf2 coding upstream 186249 4495890 ~ 4522614 (+)
slc35e3 slc35e3 coding upstream 215976 4483461 ~ 4492887 (+)
dmtf1 NA coding downstream 24993 4734262 ~ 4749242 (+)
LOC120553055 NA coding downstream 84018 4793287 ~ 4804242 (+)
LOC120553019 NA coding downstream 525881 5235150 ~ 5238344 (+)
kcnj8 kcnj8 coding downstream 673764 5383033 ~ 5392940 (+)
echdc3 echdc3,LOC102797483 coding downstream 684371 5393640 ~ 5399303 (+)
G225895 NA non-coding upstream 50232 4658184 ~ 4658631 (+)
G225892 NA non-coding upstream 52044 4656495 ~ 4656819 (+)
G225891 NA non-coding upstream 55503 4652967 ~ 4653360 (+)
G225847 NA non-coding upstream 218793 4489680 ~ 4490070 (+)
G225842 NA non-coding upstream 233736 4473611 ~ 4475127 (+)
G225935 NA non-coding downstream 28066 4737335 ~ 4738306 (+)
G225942 NA non-coding downstream 45738 4755007 ~ 4758772 (+)
G225943 NA non-coding downstream 53731 4763000 ~ 4763729 (+)
G225955 NA non-coding downstream 154589 4863858 ~ 4868807 (+)
G225973 trhde,LOC103372213,LOC102788275 non-coding downstream 370210 5079479 ~ 5163773 (+)
G225894 NA other upstream 50894 4657444 ~ 4657969 (+)
LOC120553793 NA other upstream 769909 3935674 ~ 3938954 (+)
LOC120553144 rap1b,LOC101070080,LOC100707998,LOC103368175,LOC102210937 other upstream 867689 3814481 ~ 3841174 (+)
trnat-ugu_40 NA other upstream 1174191 3534600 ~ 3534672 (+)
trnat-ugu_39 NA other upstream 1175202 3533589 ~ 3533661 (+)
abcc9 abcc9,LOC107387088 other downstream 571989 5281258 ~ 5373637 (+)
prkcq prkcq,LOC102789446 other downstream 1951251 6660520 ~ 6686639 (+)
snrpf snrpf,LOC106576293 other downstream 2609248 7318517 ~ 7321189 (+)
amdhd1 amdhd1 other downstream 2613801 7323070 ~ 7332259 (+)
klhl42 klhl42 other downstream 2654056 7363325 ~ 7368216 (+)

Expression


Co-expression Network