G225935


Basic Information

Item Value
gene id G225935
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 4737335 ~ 4738306 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU306440
ggtcagggcacgccctcatactctgcttctgactggctagtagtccttacctaggtactgtcaggttACGCCCTACAACTGTggttctgactggctagtagtccttacctagctactgtcagggcacgccctcatactctgctcctgactggctagtagtccttacctaggtactgtcaggttacgccctcatactctggttctgactggctagtagtccttacctaggtgctgtcagggcacgccctcatactctgcttctgactggctagtagtccttacctaggtatggtcagggcacgccctcatactctgcttctgactggctagtagtccttacttaggtactgtcagggcagctAAAACcaagagctcaacacacagggtgaaaagaggag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU306440 True 398 lncRNA 0.53 2 4737335 4738306

Neighbor

gene id symbol gene type direction distance location
LOC120553359 v1ar1,LOC100695840,LOC101485029 coding upstream 41152 4688927 ~ 4696183 (+)
kics2 clg23h12orf66,LOC103364500 coding upstream 143193 4590710 ~ 4594142 (+)
LOC120553579 rab3ip coding upstream 174063 4543173 ~ 4563272 (+)
upf2 upf2 coding upstream 214721 4495890 ~ 4522614 (+)
slc35e3 slc35e3 coding upstream 244448 4483461 ~ 4492887 (+)
LOC120553055 NA coding downstream 54981 4793287 ~ 4804242 (+)
LOC120553019 NA coding downstream 496844 5235150 ~ 5238344 (+)
kcnj8 kcnj8 coding downstream 644727 5383033 ~ 5392940 (+)
echdc3 echdc3,LOC102797483 coding downstream 655334 5393640 ~ 5399303 (+)
kin kin,LOC103372864 coding downstream 1775539 6513845 ~ 6519452 (+)
G225901 NA non-coding upstream 28066 4708863 ~ 4709269 (+)
G225895 NA non-coding upstream 78704 4658184 ~ 4658631 (+)
G225892 NA non-coding upstream 80516 4656495 ~ 4656819 (+)
G225891 NA non-coding upstream 83975 4652967 ~ 4653360 (+)
G225847 NA non-coding upstream 247265 4489680 ~ 4490070 (+)
G225942 NA non-coding downstream 16701 4755007 ~ 4758772 (+)
G225943 NA non-coding downstream 24694 4763000 ~ 4763729 (+)
G225955 NA non-coding downstream 125552 4863858 ~ 4868807 (+)
G225973 trhde,LOC103372213,LOC102788275 non-coding downstream 341173 5079479 ~ 5163773 (+)
G225985 NA non-coding downstream 445607 5183913 ~ 5185566 (+)
G225894 NA other upstream 79366 4657444 ~ 4657969 (+)
LOC120553793 NA other upstream 798381 3935674 ~ 3938954 (+)
LOC120553144 rap1b,LOC101070080,LOC100707998,LOC103368175,LOC102210937 other upstream 896161 3814481 ~ 3841174 (+)
trnat-ugu_40 NA other upstream 1202663 3534600 ~ 3534672 (+)
trnat-ugu_39 NA other upstream 1203674 3533589 ~ 3533661 (+)
abcc9 abcc9,LOC107387088 other downstream 542952 5281258 ~ 5373637 (+)
prkcq prkcq,LOC102789446 other downstream 1922214 6660520 ~ 6686639 (+)
snrpf snrpf,LOC106576293 other downstream 2580211 7318517 ~ 7321189 (+)
amdhd1 amdhd1 other downstream 2584764 7323070 ~ 7332259 (+)
klhl42 klhl42 other downstream 2625019 7363325 ~ 7368216 (+)

Expression


Co-expression Network