G225942


Basic Information

Item Value
gene id G225942
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 4755007 ~ 4758772 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU306448
CCCAGTGTCTCATACTTatacatttaaagaaaaagcaTGATTTCGATTTAGTGTTTGACTTATTTAACAATTAAATATCTCGTACTtatcaagtattttttttttttattgttgtcatACATAACTTCTCATACAGACCAGAGACCAAGCACACAACAGCCAAACCAGGatttaaaaataatcaaatttaAGTTAAGAGCGGATCATCAACACAACCGATGCATTGCAatctttcagttttttttttttaattttaatgtaacGTTAACTTTGAGAACCAGTTTACTGACAGTTTACTTCAGGTCCACTAGGATTCAGGAAGTGGATCACTGACACTGTGGTGGTTTACAGTgtaataaaacatgtaaaagaataaaaaaaaaaaacatgtacagcATGAGGTCTGGTGTTTCAGGTGTGACTGAAGCCTGCAGTCATGACAGTTACAACATGGCACAGAGGATTTTGTTATGAAGCGACATTTAATATCAAACGGTACAAAAGTAGAAAAAGAGTAGAAgatatttggcaaaaaaaaaaaaaaaaagtttgaatgaGGAGAAAAAAGTGCAGAAGGCCGCGGGACGAGTTCACCGACCTCGGTGTTAAAACTAGCATCGCACCTGCTGTTTAGTCATCGGAGCTGCTCTGAACCTGATACACATCTGTGTACATATACGGGATataaatacatactgtgtacagatacagtatgagCTGAGGGTTCAGCTGTCTCACCTCACAGATGGCGGTCACAGGTTTGATTCCCAGTCATCAGGTGGTTTAAACCGGTGGTTTCCTATCCTTTTCGGCTACATATAAGCATAATGTCAAAGAAACATTCTGAGATTAATAGGCCAAAAAGTATTTATACAACATGAAACACGCTTATATTAATGGATTTAATAACTCTCTGTCTCAATCTTCTATTTGGGGGATAATCGTGATctaatgctgcattcatgtgctgTTGGAATAACCGTAACATTTGTTCCCGTACTCGGAAAATTCATGTGAATGCCCTCCTCAATTTGAAAAACAACTCGGTAAGtggactagtctcgcattgccagccctatctccacagtgctgtggagtaaggtctggctacaccacagatgcattctgggattggaggcatgatgtctctctctcatgggtgggccaaattctctgtgcgggcaaaacagagaaaggggaggtaaccttgctccttatgacctcataaggagaagattcctgattggcccatctgagctttcattttctcaaatgcagagcaggatacccagggctcggtttacacctatcaccatgtctagccactgggggaccataggcaggctgggggaactcatattaatgttaaaaaaaactcaatctcagtcttgggtggcactaagctccagacgcaaaatagtctcgggaaggaacttgttttggtggaacatttgcaccccgcaaaaaaaacaatatgaaatgaaggttactgttcacacaatacggTAACGTGAGATGCTTGAGTGCatcgctgtgtgtacttcgtccgaagcaatcccaccaatcggtcccaagttagagaggaaatgcagtAAACATagtctttgtaaatctttaccataattccctgaaagaaccattttcagtgtgtagcttgctagcttgaagtttgttgttgtttcccgaagtgAATGGAGATTGAAAatggcagcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagagagcggaagctGAGGGGCATGCGGCGTgtgatgtcaggcaattatcctggaaatgtacttccgttgatccagactaagtGGGCGAACATTATGTTACACAACGTGGACAGAAGTAAATGTTGGGTTTATGGTAAAAACGTATTAATTCACGTATTGCATACACATTTTTTGCCCACATTTAATATGGTATCAGCTTGTAACTGTTAGTTGCTGTCCACGTAGATTGACCTAGCCTAGAAATGTAGAcccaccctagcggcagcaaatgtaatttacagccagggtcgtctagcagCTCTCCGTTTAGCTTGCgagctgaaaaaaacaaactctagtcaggccaatcacatcgtgtacagagtcggtgggcgggcttaacataatgatggcagagttgcgacggttccgcgtgaattccctgctacttgaaaacaaagaagatggctgctgctgctggagaacagcggtcttctggaagacttggagttcagcttttctttgagaaaagaacaaagaacggcactgaagtcattcttaaagaaggaagatgtgttcggagttttgccgaccggatacggcaaaagtttaatctatcaactagcccttcttcgttgctctgcctggttgtagcgctatcctattacgtgcagagggaatttgacagacaacgtttatcccgcccctcggattgagctctgccaatggggagttcccagacctcaacatctggatgtgggtctggcttgtcaggctaagatTGACCTTGATTAGTTAGAAAAGTTATTTATTAACGTTGACCTATTAAGTCAGGTAAATACGGGAAAGAGCTATCAACATGTTTAAACGCTCTgagcaataaaatacaacacatcgTCTTTGTAGCGTCCATGTTGTTTCCACATTATGAATATTCCCCCCCCATGATTTTAAGCAGATTTATGGACGTTTACTAGCAATGAACATCAGAAACAAGAtaatatttcacaataaaacaagcaaatttaaacaaaagaGGTCATTTGTGTTGCAGAAATTAGATTTTTCTCTTATTTCCTATCTTGTTATCCACCTTGTGACCCCTCAGATTATTTTGCCACCCTGTCGGGGGGTCTCACGCctcaggttgggaaccactgcccacacaaaaataaatgaaataagcaGAAAGGATGAATGCCTGTAAGAACATGTGTGATGACTGTCTGAATCATCTGGAGCCGAAATTCCAACGCACCTCAATGAGTTCAGACGGATGATTAACGTGTGGCGTCATCAGGGTGGCTTCGTTTCGACGCTCGACTACTGCAATTTCCCTTTTCTCTGGTTTAAATACTACCCTCTCTAAAACCAGTGCCTGCAAgtgctcattttttttttattttaaagtgctgCTGCTCACATATAATGGTCTAGCTCCACCACACTTAATGAGCCTCATCACACGCTGGAACATTTCAGCAGGGAAGACTGAATCCCCAGGCAGCAGTTTTTTCTCCTGTGATCCATTTAAATACAATAATCTCTCAGCGAAAAACCTGTTTCTTCATGTGCAGAACGTCTCTCTATGATGCAGGAAAGTGGCAGTGTGGCTGCActattattgtctttttttttagttcttCCTCGTCTTAGGAGCGCTCCTgaattggtattgaaaaaaactatttctttCTAGAAATACAAAGTAGATAAATATTTTTCTCACATGGTCAGCTCTTCAGTAGTTCATTTCACTTCTTAGAAGGGATTTCCCAAATCATTGCTGCATTAACTAGCAGGGCACTCAAGGCCGTGCcttatctcacaatgttaacaaaagtgaaaaataaatttgtgtatgttgtgtaatgtaatgtcttctgtgaaaacGACTTGGCGAGTAGTCACCACGTCCCAAAGCTTCCAGCACCACCTATTAGGTGAGGACATGTGAACTTTCTGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU306448 True 3766 lncRNA 0.42 1 4755007 4758772

Neighbor

gene id symbol gene type direction distance location
dmtf1 NA coding upstream 5765 4734262 ~ 4749242 (+)
LOC120553359 v1ar1,LOC100695840,LOC101485029 coding upstream 58824 4688927 ~ 4696183 (+)
kics2 clg23h12orf66,LOC103364500 coding upstream 160865 4590710 ~ 4594142 (+)
LOC120553579 rab3ip coding upstream 191735 4543173 ~ 4563272 (+)
upf2 upf2 coding upstream 232393 4495890 ~ 4522614 (+)
LOC120553055 NA coding downstream 34515 4793287 ~ 4804242 (+)
LOC120553019 NA coding downstream 476378 5235150 ~ 5238344 (+)
kcnj8 kcnj8 coding downstream 624261 5383033 ~ 5392940 (+)
echdc3 echdc3,LOC102797483 coding downstream 634868 5393640 ~ 5399303 (+)
kin kin,LOC103372864 coding downstream 1755073 6513845 ~ 6519452 (+)
G225935 NA non-coding upstream 16701 4737335 ~ 4738306 (+)
G225901 NA non-coding upstream 45738 4708863 ~ 4709269 (+)
G225895 NA non-coding upstream 96376 4658184 ~ 4658631 (+)
G225892 NA non-coding upstream 98188 4656495 ~ 4656819 (+)
G225891 NA non-coding upstream 101647 4652967 ~ 4653360 (+)
G225943 NA non-coding downstream 4228 4763000 ~ 4763729 (+)
G225955 NA non-coding downstream 105086 4863858 ~ 4868807 (+)
G225973 trhde,LOC103372213,LOC102788275 non-coding downstream 320707 5079479 ~ 5163773 (+)
G225985 NA non-coding downstream 425141 5183913 ~ 5185566 (+)
G225986 NA non-coding downstream 426895 5185667 ~ 5186483 (+)
G225894 NA other upstream 97038 4657444 ~ 4657969 (+)
LOC120553793 NA other upstream 816053 3935674 ~ 3938954 (+)
LOC120553144 rap1b,LOC101070080,LOC100707998,LOC103368175,LOC102210937 other upstream 913833 3814481 ~ 3841174 (+)
trnat-ugu_40 NA other upstream 1220335 3534600 ~ 3534672 (+)
trnat-ugu_39 NA other upstream 1221346 3533589 ~ 3533661 (+)
abcc9 abcc9,LOC107387088 other downstream 522486 5281258 ~ 5373637 (+)
prkcq prkcq,LOC102789446 other downstream 1901748 6660520 ~ 6686639 (+)
snrpf snrpf,LOC106576293 other downstream 2559745 7318517 ~ 7321189 (+)
amdhd1 amdhd1 other downstream 2564298 7323070 ~ 7332259 (+)
klhl42 klhl42 other downstream 2604553 7363325 ~ 7368216 (+)

Expression


Co-expression Network