G225985


Basic Information

Item Value
gene id G225985
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 5183913 ~ 5185566 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU306501
CTCGgctttgtgacgatgcattttccagttgatccaagaggctttttaaagacttttttttttagattaggAGAGCTTAGCtctcaacacataaaggaacactCTATGTTTCAGTTTATcaaaaacattcaacatcaacacatctggagagaACTGGACAGGAAATGGGATGAAAAActgtcatctgaaaagtaactaaagctgtccgACAAAGTGgattaaaaagtacaatatttacctgagatgtagtggagtacaagtatAAAGTTACACAACaaggaaatactcaagtataGTACAACTCAAGTATAGTACAAGTACCTTGAATTGGAGTGGAgtaagttcaattcaattttatgtatagtatcaaatcataacaagagttatctctgGACACTTATATGgacacagatagagtaggtctagaccacactctataatttacaaagacccaacaattccattaattcccccaagagcaagcatttagtgcactTAGTTGCATTCCACCATGCACTGTGTTtgatcaacccgttctcactccgaacttgtaaaatacggacgtttggaccgtggctgtcagcgtctgaagcgacgataaaagcgcccttcagcgtgtttgtagaacGTACCCGGGAAAGCAGCAGCTACACGAGGTTTGAAGATGACGTAACGCTAAGAGTGACTACgttagcgagtagtatgtaaggccgaaattccgcatagggaggttggtgggggggtggatgggtcaaacacaggactttcacccaggagaccggggatcgtgtccagTGTGTCACTTTTCctaaagtcgctttcttcttttcctaaacacaaccgtcccgttattcccACACGTCAccgaaacgtaagcccacccacgaccttttcttaaacccaaccGCCCCTGTTATTCCCAcgtgtcacggaaacgtaagcccacccacgaccttttcattaacataactgcgtcaaaagggacgccaatagtGCGTTTAGATGAAGTGCGTTAtatgatgctaaaggagacttctcgcgtcaataacaacaacaaaggcatctgaccaagcgtccgtattttacgagatgggagtgagaatctgttggtTTGATTAACCGCCATCAATAAACCAGCGCCTAAATGTTGATGCAGCggggggactgagtacccactTAAAGCCACATCATTTCAGACTGGTTATCTTCTTCTCCAGTTCATACACACCAGTATGAACTGTGGAGACAAACGTCTATGCCTGAATCATAAAGATAAACTGCTCCTCATCACATGTGAGTCACACAGTGTTGTTTAGTTTGCCTGTTCGCTGGTGTGTGCTGCCATCTAACGGCTGCTGGTTTATTCTGTGAGTAGACAAACGATGTGGCCAAAAGTACGTGGACAAATGAACACTACACCCATATGCCATAGTTGAGTTTCTGACTTTAAAAGCATGCACATTAGTCTGCTTTCCCCCAGATTTTGGAacctggctgcagggatttttcttaacccttatgttgtcttctgggtcaaaactgaaaatcaaccatttgttttatgttttggtctcttttttctgacacttttggcgcctttttttttttaaacattcaacGCTTCCTTTCACTACCATATAtgaacaccactaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU306501 True 1654 lncRNA 0.43 1 5183913 5185566

Neighbor

gene id symbol gene type direction distance location
LOC120553055 NA coding upstream 379671 4793287 ~ 4804242 (+)
dmtf1 NA coding upstream 434671 4734262 ~ 4749242 (+)
LOC120553359 v1ar1,LOC100695840,LOC101485029 coding upstream 487730 4688927 ~ 4696183 (+)
kics2 clg23h12orf66,LOC103364500 coding upstream 589771 4590710 ~ 4594142 (+)
LOC120553579 rab3ip coding upstream 620641 4543173 ~ 4563272 (+)
LOC120553019 NA coding downstream 49584 5235150 ~ 5238344 (+)
kcnj8 kcnj8 coding downstream 197467 5383033 ~ 5392940 (+)
echdc3 echdc3,LOC102797483 coding downstream 208074 5393640 ~ 5399303 (+)
kin kin,LOC103372864 coding downstream 1328279 6513845 ~ 6519452 (+)
itih5 itih5 coding downstream 1349609 6535175 ~ 6553086 (+)
G225973 trhde,LOC103372213,LOC102788275 non-coding upstream 20140 5079479 ~ 5163773 (+)
G225955 NA non-coding upstream 315106 4863858 ~ 4868807 (+)
G225943 NA non-coding upstream 420184 4763000 ~ 4763729 (+)
G225942 NA non-coding upstream 425141 4755007 ~ 4758772 (+)
G225935 NA non-coding upstream 445607 4737335 ~ 4738306 (+)
G225986 NA non-coding downstream 101 5185667 ~ 5186483 (+)
G225983 NA non-coding downstream 1400 5186966 ~ 5204159 (+)
G226014 NA non-coding downstream 142430 5327996 ~ 5328369 (+)
LOC120553187 NA non-coding downstream 188718 5374284 ~ 5412002 (+)
G226027 NA non-coding downstream 359280 5544846 ~ 5552199 (+)
G225894 NA other upstream 525944 4657444 ~ 4657969 (+)
LOC120553793 NA other upstream 1244959 3935674 ~ 3938954 (+)
LOC120553144 rap1b,LOC101070080,LOC100707998,LOC103368175,LOC102210937 other upstream 1342739 3814481 ~ 3841174 (+)
trnat-ugu_40 NA other upstream 1649241 3534600 ~ 3534672 (+)
trnat-ugu_39 NA other upstream 1650252 3533589 ~ 3533661 (+)
abcc9 abcc9,LOC107387088 other downstream 95692 5281258 ~ 5373637 (+)
prkcq prkcq,LOC102789446 other downstream 1474954 6660520 ~ 6686639 (+)
snrpf snrpf,LOC106576293 other downstream 2132951 7318517 ~ 7321189 (+)
amdhd1 amdhd1 other downstream 2137504 7323070 ~ 7332259 (+)
klhl42 klhl42 other downstream 2177759 7363325 ~ 7368216 (+)

Expression


Co-expression Network