G226028


Basic Information

Item Value
gene id G226028
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 5552253 ~ 5552473 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU306557
tttttttctcgacaCCTTCCTTGAAAACCCTTTCCCAGAAAACAGATCCAAATGAGGTCTCATGCAACAAAacagaagaacaaaaaaaaaaaataataataataaaagtccAAAAAAGCTCAAAGTTCAAAAAAAGGTCAGTAGgcagcgaggaggaggagaaccaGGTTATGATCACGTGAGCTCGGAAAAagacatcagaaaaaaaaaaaatgacgggg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU306557 True 221 lncRNA 0.37 1 5552253 5552473

Neighbor

gene id symbol gene type direction distance location
echdc3 echdc3,LOC102797483 coding upstream 152950 5393640 ~ 5399303 (+)
kcnj8 kcnj8 coding upstream 159313 5383033 ~ 5392940 (+)
LOC120553019 NA coding upstream 313909 5235150 ~ 5238344 (+)
LOC120553055 NA coding upstream 748011 4793287 ~ 4804242 (+)
dmtf1 NA coding upstream 803011 4734262 ~ 4749242 (+)
kin kin,LOC103372864 coding downstream 961372 6513845 ~ 6519452 (+)
itih5 itih5 coding downstream 982702 6535175 ~ 6553086 (+)
sfmbt2 sfmbt2 coding downstream 1026639 6579112 ~ 6636681 (+)
gnsa gns,LOC102788091 coding downstream 1166635 6719108 ~ 6734409 (+)
LOC120553270 NA coding downstream 1423859 6976332 ~ 6995588 (+)
G226027 NA non-coding upstream 54 5544846 ~ 5552199 (+)
LOC120553187 NA non-coding upstream 140251 5374284 ~ 5412002 (+)
G226014 NA non-coding upstream 223884 5327996 ~ 5328369 (+)
G225983 NA non-coding upstream 348094 5186966 ~ 5204159 (+)
G225986 NA non-coding upstream 365770 5185667 ~ 5186483 (+)
G226029 NA non-coding downstream 48 5552521 ~ 5553325 (+)
G226042 NA non-coding downstream 197655 5750128 ~ 5776433 (+)
G226085 NA non-coding downstream 366621 5919094 ~ 5919414 (+)
G226097 NA non-coding downstream 545205 6097678 ~ 6097908 (+)
LOC120553126 NA non-coding downstream 630571 6183044 ~ 6289899 (+)
abcc9 abcc9,LOC107387088 other upstream 178616 5281258 ~ 5373637 (+)
G225894 NA other upstream 894284 4657444 ~ 4657969 (+)
LOC120553793 NA other upstream 1613299 3935674 ~ 3938954 (+)
LOC120553144 rap1b,LOC101070080,LOC100707998,LOC103368175,LOC102210937 other upstream 1711079 3814481 ~ 3841174 (+)
trnat-ugu_40 NA other upstream 2017581 3534600 ~ 3534672 (+)
prkcq prkcq,LOC102789446 other downstream 1108047 6660520 ~ 6686639 (+)
snrpf snrpf,LOC106576293 other downstream 1766044 7318517 ~ 7321189 (+)
amdhd1 amdhd1 other downstream 1770597 7323070 ~ 7332259 (+)
klhl42 klhl42 other downstream 1810852 7363325 ~ 7368216 (+)
nrip2 LOC102781986,LOC100711207,LOC102191975 other downstream 1817969 7370442 ~ 7400399 (+)

Expression


Co-expression Network