G226199


Basic Information

Item Value
gene id G226199
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 6732438 ~ 6735270 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU306781
TTtatttggacaaaaaaaaaaaaaaacaagccaaaAATACATAATCATCAAAAAGTActctaaaaataaaactaaatggtTTCAAAAGAAAATAGCTCTGACAGATCGGAAAGTGCATCAGTGAATTGAAACGAGGAAATATAACGACACGTCTGTCTCAGTGTTCTCACATTAGTTCAGTCCAGAAGAAAGTATTATATAGTATCATAAAGTATTATTCCATTACCAGCTACAGTGGAACAAAATGCTAAATCATTGATTCACAATGAACAACCAGTTTGTCTGCTTTGCTTGTCAGAGAGAAGATAattcacaaaatgaacacacacacacacacacacacacacacacacacacaatgtcatgCAGATGTTATTAAATACTGTCCCTCAAAAGGCTCCTGATCAGGTCTTTGGTTGGATGTTAATCTCCACACAATTAAAAAATTGCCACAAAATACTGGCTGTAGGCAGCTTTGATCTTAAATATATTTCAACAGCGACGGAAGGATTTAAGaaattatttagattttttgtctTAATGTATTTtatggcattaaaaaaaaaagacgtgaTCCAAAAGAAACAATCACTTCCCTTAAAGTTTGAAGGAGGTCGCATTGAAAAAGATATCAAATATAGATATATTATGATTTTATTTGGCCTTTAAATCTTATCGCATCCAACTCAAATCCaaatgagaataaaaaaaaaaaaaaaacataactgaaACTAAAACTGTGCTGACTGAAACAGTGACGATGAAAAaaaggacttttattttggcaAGAACGTTAATCTCTATATCGAACCAAAGTCTAACATTTGGCTCAGTGAAACGctacaaaacaagaaataagTGAAATATTTGATTTGATGAAGTTGTCAAATCTTCCTCCTCGACATAACAATGCATGTGTTTCTGTTCATTTAAAGTGGCAGTTAGCAAGTTTGAAATGTTCAACACGTGATGGAATAAAATCCAAATAGGGAATCAAGACAAAAAGTGGCAATTAATCTGAAATTtgaaaatgaccaaaaaaaagGTGCTTTAACACTGCTCACAGTCGAGACAAATCACTGAAATAATTTACGTCTGATGTAGGGGACACTTAAAATGTCAATAATGAGCCGTTATGTCaagtttttaaatgtaactTGGATGGAGGCTTTCATTGATGCCACTAGCAATTCGTATACTATTCTTATAGTCACAAAAGTTGCTTTTTACTCAGTGTTTTCTGATACACTTGAATGATAGATGGTTTTTTTTgccaaaacttgctaaagatcTGACCAGTTTTAAGTCTGTAATTCCGGTTTCTGTTTGCTAAATGTTCAGTCATGTTGATTCTTCTGCCCATCTGATTTATTGTGACAAAAATAATCTGAAAATTTGTGTCCAAATTTTTCCCTTAAAGCCACCATGCACCACATGTTGGCTGCTTCCAGTGTCTAATAACTATTCGGTCATTTTGTTCATGATATGTTGTTGACTGTGGAAGTGACAGCTGGGGTCATGTCTGTGAGACGTTTTCTGTTGGACTGCCTGTTTAGAAAGTTTCTGTGGGTGGCGCTCTTTACAACCCagttcttttaatttttttatttctagaTCACATGAAACATCTGTCCTGTGAATCTGAAGCCAACATTCCGGTTGGATTCAAGCGTGCGTTTCCTTCGCCGACAGAGTTCACCTTTTGTTCAACGCTGACGTTTTTTTATCGTCGTGTTTAGTTCATTATCACACTACAGATATATGCGGTTTACAGGCTGTGATCGCTCCGatcagtatttattttattacccgCATCAGAAGCGTGACGTCCTTTGTCAGGTCATGTGACCGTACCTTTACCGTCTAATACAGGATTGTTTCGCTGCATTCGGTTGGTCCTCAACAGATTATCAAGTAAccacgttgttgttgttgatcaCTACGTGTTAAACTCAAGAGATCTACATTATCACAAATTACACTGTAGTTATTTACCTGGTATTGTTTGCCAGCTGTCTATTAGGCTCATAGACTTTATATAAAGTTGAAGGTAGGCGGTGGACACTTTTTATATGCAGTCTATGATTAGGCCATACACAGTCGAGGGATAATCAATGTCAAAAGGTATTGCTAATTTTGATTGGTTTAGTAAAAATACCCCAAAACAAAAAGATTCTCACAGCAGGCAACCTGTACAGTATTCAGACGagtaaataacacaaaaacctGGCCACTGTTTTGGATCATTGATATGATTTTctcaacagagagaaaaaaaaacagacttggATTTATAAGAACTGGgtcaaatatttgtttgcagAATTTTAAATTGATACGACTGACTGAGCGGACACAATAATGCTTACACGAAAACAGGAATTAATGGCTTGCGAGTGTAAATCCATCCTGAATAATTTCCCTGCACACCCACTGACAAACTCACTAAACGGCAGCCCAATCTGGAAGCTTAACAAGGTGGGTTCTGCACCCAGAGAGGCCTCCGTCTCTATGGCAACCGCCCCGATCCCTTCTCCATCCATCTACAAAGAGACTGGCTCAGGAGGCCTGAAAACAAGGCTACAATAGCAGGAAAGGctgaatatataaaaatacaatacagcCTTTCTCTTCCTCCGTCTTCTCCCTCCGTCCTTCTTCTCACTTCATCTACTGTCGGAGTCTGCCGAGCCGCCAGCTGTGGCTCGTAAACATCTGTCGTGGGTCGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU306781 True 2729 lncRNA 0.37 2 6732438 6735270

Neighbor

gene id symbol gene type direction distance location
tbc1d30 tbc1d30,LOC102788373 coding downstream 14494 6690574 ~ 6717944 (-)
tmem110l LOC101465056,LOC103375076,LOC102308360,LOC100692898,LOC102790606 coding downstream 157956 6553458 ~ 6574482 (-)
itih2 itih2 coding downstream 198777 6519357 ~ 6533661 (-)
atp5f1c atp5c1 coding downstream 219270 6506578 ~ 6513168 (-)
gata3 gata3,LOC102792415 coding downstream 299712 6417232 ~ 6432726 (-)
zgc:194209 LOC103375033,LOC102787798,LOC102205194,LOC101467670 coding upstream 1336 6736606 ~ 6745985 (-)
rassf3 rassf3,LOC102298244,LOC102210289,LOC103364097,LOC106956171,LOC103129390 coding upstream 12231 6747501 ~ 6823905 (-)
LOC120553692 NA coding upstream 89251 6824521 ~ 6831712 (-)
dgki NA coding upstream 104870 6840140 ~ 6920612 (-)
creb3l2 creb3l2 coding upstream 191041 6926311 ~ 6962094 (-)
LOC120553101 NA non-coding downstream 43616 6634650 ~ 6688822 (-)
G226113 NA non-coding downstream 290114 6442038 ~ 6442324 (-)
G226083 NA non-coding downstream 898224 5833734 ~ 5834214 (-)
G226074 NA non-coding downstream 1178023 5553966 ~ 5554415 (-)
G226070 NA non-coding downstream 1284865 5446741 ~ 5447573 (-)
G226216 NA non-coding upstream 188761 6924031 ~ 6926245 (-)
G226244 NA non-coding upstream 293478 7028748 ~ 7028958 (-)
G226259 NA non-coding upstream 329355 7064625 ~ 7072997 (-)
G226273 NA non-coding upstream 366668 7101938 ~ 7107207 (-)
LOC120553545 NA non-coding upstream 367242 7102512 ~ 7105702 (-)
G226200 gns other downstream 1656 6730307 ~ 6730782 (-)
LOC120553807 LOC104934913 other downstream 1469386 5242890 ~ 5263052 (-)
cpm cpm,LOC106925010 other downstream 1949679 4756921 ~ 4782759 (-)
LOC120553649 NA other downstream 2192641 4529987 ~ 4539797 (-)
G225751 NA other downstream 2681247 4047316 ~ 4051191 (-)
tmem243b tmem243 other upstream 338623 7073893 ~ 7086322 (-)
meig1 meig1 other upstream 351674 7086944 ~ 7089168 (-)
usp44 usp44,LOC102783730 other upstream 533767 7269037 ~ 7278324 (-)
LOC120553151 LOC107386793,LOC104950937 other upstream 686895 7422165 ~ 7494307 (-)
G226495 LOC103356655,LOC105934024 other upstream 1153301 7888571 ~ 7891311 (-)

Expression


Co-expression Network