G226216


Basic Information

Item Value
gene id G226216
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 6924031 ~ 6926245 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU306808
TCTCTGCTTAATCAGATACACTgtaatagtagtaataatagtagtaataataataacaataataataataataataataataataataatttcaaagAGGCACTGGTTGCCTTAGTTTCTTAAGTAACGTTGCACTGAATTATTCTTACATGAGTCAACTTATCAGTTGTATCTGTTGTCTTAATTGACCCGGCTTGAATCACGTTGAGATAAATTCAAATAGATGTATTTAATGATGCAGCGTGGCATTTATTCCAGTGGAAAGTTTATTAAAATATGACACGTGAGGCTTTTTACAGGACACTGAAAGAGAACCTTTGTATTTATAGAAaccttgtttgttttgttaaagttaTTGCTTTTTGTAGTTCTTCTAATGTTTTTATTCCATTCCAGTGAGGCATACATCCCATTTTGATACTTGTttgtgttcatgttgttttttgtttgttttcttttgctatTTTATTGTACTcttttatatattgttattgttatattgttatatattttCTACAGCTGACTTGACATTTCAAACATCGAGGGCTTAACTTGGGGGTTCCTGcactcatttgaaaaaaaagtttcaaaatctttgttgatttaaaaacaccatattttggaTGTTTATAGTGTGCTGATCAATCTGCAGCTCAAATCTGCTATTTTCTCACAATTAATACCGAATCCAGttaaataaaaagcaaaagAGAGCACCTTGGGTGCGAGTCAAGAGTCAAAAGCATCTTGAGGGGACTATTTTTTTGTAAGGTTGCTCTTATAGCTTTTGTGTGCAGTTGAGAACTACACCTCCTTTAAGAATAGTTGGACATTTTaggatatatcctttatttGGCTTCTTgtggagagttagatgagaagatcgataccactctcaaaTTTGTATGGTAAaaaatgaagctacagccaCCAACCAGttggcttagcttagcataaatactggaaacaTAGGGAAACAGCTCTTATATGtccaaagataaaaaaaaaacaaaaaaacacccaccagcacctctaaaatTCATAAATTTCCAAATGAGATTTGAGGTATTCATTTGTGAGCTTCAGAGGTGCTGGTAGACAGGTTTTGTTACCTTGTTACCTTAGACAGAGCTACGCTAGCTGTTtccatgctaagctaagctaagagCCTGCTGtcagtagcttcatatttattgtacagacatgagtggtatcgatcttctcgtCTAACTCTGTGCAAAAAGGTGAAAAGGCGTATGTCCCCAAATGTCAGCCTTTGTCTTAAAAAAAGTGTGATGTAACCACAGAATGAACTTTCTGCACTAACTGTATTTGGCCTTTAATCCTGCGATGCTTTTGCCTTAATCACTTTTACTGTCAGTTCCAAGAGTCTTTATTTGCTATTTTTCAGCATTTGCCAAATAACTTTTCCCCGACATGAAAAAAAGTATCTATTTTTGTAAATATAAGTTGTTAATAAATAAGCAAGTCTAAATATGTCTGGGATCTGTAGTTTATAAACCAATCCATAATTCATTCAGAGTTTATTTTGGATGCAATGTTGTTGATAAATTATAAATGTAGCTTCACAGTTTGTCCTGACTTTCTGTTGGGTTTACTTTGTTAATTACAGGTCATGGCTTTAAAAGTCTCACTTGTCTACTTCAAGTGTATAACGGATGGATTCTTACATTTCTGAGCTTTATTGAAACATGTTATTTCATGTATGTTACAGACCTCTTGTGTTCCAGGTCTGTGCATCCATGTTGtaaatacaaacacatttgtTAATAATTAAATAGTATTAAGTAAATTAAGCCCAGAGACATAAGAAATTGTGACTCACACTGTGAGGATGAGTCAAAGTGTCAACAGAAATAGATCCCAGTGCTGTTTAGAGACTATAAAACAATATTTGTATATCCTGGTCTCATATTTTAAGCTTTGTAGATAAATCAGTGGCTAGATTGTCAAAGATTTATTGTTAAATCTGTATGTAAGGACGCATTGATGATAGTCTTTGCTCCAAGCCACAGCAACTTTCTTCACTCACTGCTGAGTCTATAAACAGTAGAGATCATAGGAAACACAAGATATTGATTTTATTCTAACATTTTTATGGAAAATTCTCTTCTAGTTTAAACTAGCAGCCAGTGGAGAGTTTTTCTTCTCCCAAATCAGATTTATTTTCCATGTTGCTTCTTTGTAAAGCCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU306808 True 2215 lncRNA 0.33 1 6924031 6926245

Neighbor

gene id symbol gene type direction distance location
dgki NA coding downstream 3419 6840140 ~ 6920612 (-)
LOC120553692 NA coding downstream 92319 6824521 ~ 6831712 (-)
rassf3 rassf3,LOC102298244,LOC102210289,LOC103364097,LOC106956171,LOC103129390 coding downstream 100126 6747501 ~ 6823905 (-)
zgc:194209 LOC103375033,LOC102787798,LOC102205194,LOC101467670 coding downstream 178046 6736606 ~ 6745985 (-)
tbc1d30 tbc1d30,LOC102788373 coding downstream 206087 6690574 ~ 6717944 (-)
creb3l2 creb3l2 coding upstream 66 6926311 ~ 6962094 (-)
ssbp1 ssbp1,LOC102786007 coding upstream 37031 6963276 ~ 6974561 (-)
c23h12orf56 NA coding upstream 104967 7031212 ~ 7048093 (-)
eri1 eri1,LOC103356631,LOC102785739 coding upstream 227555 7153800 ~ 7160787 (-)
tmcc3 tmcc3 coding upstream 236761 7163006 ~ 7208199 (-)
G226199 NA non-coding downstream 188761 6732438 ~ 6735270 (-)
LOC120553101 NA non-coding downstream 235209 6634650 ~ 6688822 (-)
G226113 NA non-coding downstream 481707 6442038 ~ 6442324 (-)
G226083 NA non-coding downstream 1089817 5833734 ~ 5834214 (-)
G226074 NA non-coding downstream 1369616 5553966 ~ 5554415 (-)
G226244 NA non-coding upstream 102503 7028748 ~ 7028958 (-)
G226259 NA non-coding upstream 138380 7064625 ~ 7072997 (-)
G226273 NA non-coding upstream 175693 7101938 ~ 7107207 (-)
LOC120553545 NA non-coding upstream 176267 7102512 ~ 7105702 (-)
LOC120553544 NA non-coding upstream 179492 7105737 ~ 7107199 (-)
G226200 gns other downstream 193249 6730307 ~ 6730782 (-)
LOC120553807 LOC104934913 other downstream 1660979 5242890 ~ 5263052 (-)
cpm cpm,LOC106925010 other downstream 2141272 4756921 ~ 4782759 (-)
LOC120553649 NA other downstream 2384234 4529987 ~ 4539797 (-)
G225751 NA other downstream 2872840 4047316 ~ 4051191 (-)
tmem243b tmem243 other upstream 147648 7073893 ~ 7086322 (-)
meig1 meig1 other upstream 160699 7086944 ~ 7089168 (-)
usp44 usp44,LOC102783730 other upstream 342792 7269037 ~ 7278324 (-)
LOC120553151 LOC107386793,LOC104950937 other upstream 495920 7422165 ~ 7494307 (-)
G226495 LOC103356655,LOC105934024 other upstream 962326 7888571 ~ 7891311 (-)

Expression


Co-expression Network