G226306 (ndufa12)


Basic Information

Item Value
gene id G226306
gene name ndufa12
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 7213392 ~ 7216386 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU306949
TAAATGTCTGTTTAGAGATTTTATTTAGGACATGTTGGCAGGATaccataatttacaaatacGCAGTAAAGCAGTTCACTGAGCTCCAGCTTTGGGTGGAACCCACTCGTGGATCTTCTTGCGGGTGGTGGAGTAGGGCACGTACTGCTGTGAGCTGCCACTCACGTTGAACTGGTGGACCTCAGCCAGGAACTTCTTTGGCTCTGGTGGGTGTGTGGTGGGAGGGTCGTCGGTCATACAGTGCAGCCAACGATGCCATTCAGCTGGAACCATGCTGCCGTCCACCTCCCACATGGTGTTCTTTCCGTTCATCTCTGTGGTGTAGATCACCCAGCGGTGAcgtcCAAAGAAGTAGTGCTTGCTGTCCTCATAGTATTTGTTTCCATATTTATCCACGCCAACCAGGGCTCCTGTCTTCACATCATTCACCCTGAAAAACTGAGTTAGAAAACCTCGGACTCCACCATGACCTCCTATTTGCCCCAAAGCCCTTCGGACGAGGTTCGCATACTCCGCCATCTTGCGACGGAAGAATTAC

Function

symbol description
ndufa12 Predicted to enable NADH dehydrogenase (ubiquinone) activity. Predicted to be involved in response to oxidative stress. Predicted to be located in mitochondrial inner membrane and respirasome. Predicted to be part of mitochondrial respiratory chain complex I. Human ortholog(s) of this gene implicated in nuclear type mitochondrial complex I deficiency 23. Orthologous to human NDUFA12 (NADH:ubiquinone oxidoreductase subunit A12).

NR:

description
PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU306949 True 538 lncRNA 0.51 4 7213392 7216386

Neighbor

gene id symbol gene type direction distance location
trnaw-cca_35 NA coding upstream 66052 7147269 ~ 7147340 (+)
lamb1b lamb1,LOC103364103 coding upstream 69387 7115962 ~ 7144005 (+)
dclre1c dclre1c,LOC106595997 coding upstream 113388 7089340 ~ 7100004 (+)
cd9b LOC103364503,LOC102202019,LOC101471915,LOC102790892,LOC100690342,LOC102311668 coding upstream 140389 7051855 ~ 7073003 (+)
LOC120553268 NA coding upstream 201112 6976407 ~ 7012280 (+)
vezt vezt coding downstream 24466 7240852 ~ 7255885 (+)
metap2a metap2,LOC104945620,LOC102784010,LOC102294382 coding downstream 40884 7257270 ~ 7267450 (+)
pah pah coding downstream 293578 7509964 ~ 7524419 (+)
LOC120553155 pah coding downstream 330042 7546428 ~ 7562205 (+)
LOC120553589 parpbp,LOC102779589 coding downstream 376493 7592879 ~ 7605838 (+)
G226292 eri1,LOC102785739 non-coding upstream 55505 7157490 ~ 7157887 (+)
LOC120553621 NA non-coding upstream 712332 6429094 ~ 6501060 (+)
LOC120553126 NA non-coding upstream 923493 6183044 ~ 6289899 (+)
G226097 NA non-coding upstream 1115484 6097678 ~ 6097908 (+)
G226085 NA non-coding upstream 1293978 5919094 ~ 5919414 (+)
G226316 NA non-coding downstream 51123 7267509 ~ 7268758 (+)
G226317 NA non-coding downstream 52718 7269104 ~ 7270753 (+)
G226318 NA non-coding downstream 54931 7271317 ~ 7271707 (+)
G226319 usp44 non-coding downstream 55691 7272077 ~ 7272316 (+)
G226352 NA non-coding downstream 118668 7335054 ~ 7346162 (+)
prkcq prkcq,LOC102789446 other upstream 526753 6660520 ~ 6686639 (+)
abcc9 abcc9,LOC107387088 other upstream 1839755 5281258 ~ 5373637 (+)
G225894 NA other upstream 2555423 4657444 ~ 4657969 (+)
LOC120553793 NA other upstream 3274438 3935674 ~ 3938954 (+)
LOC120553144 rap1b,LOC101070080,LOC100707998,LOC103368175,LOC102210937 other upstream 3372218 3814481 ~ 3841174 (+)
snrpf snrpf,LOC106576293 other downstream 102131 7318517 ~ 7321189 (+)
amdhd1 amdhd1 other downstream 106684 7323070 ~ 7332259 (+)
klhl42 klhl42 other downstream 146939 7363325 ~ 7368216 (+)
nrip2 LOC102781986,LOC100711207,LOC102191975 other downstream 154056 7370442 ~ 7400399 (+)
ascl1a ascl1 other downstream 207232 7423618 ~ 7426254 (+)

Expression


Co-expression Network